KEGG   Helianthus annuus (common sunflower): 110891379
Entry
110891379         CDS       T05101                                 
Name
(RefSeq) RNA-binding protein Y14A
  KO
K12876  RNA-binding protein 8A
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
han03015  mRNA surveillance pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110891379
  09122 Translation
   03013 Nucleocytoplasmic transport
    110891379
   03015 mRNA surveillance pathway
    110891379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110891379
   03041 Spliceosome [BR:han03041]
    110891379
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110891379
Spliceosome [BR:han03041]
 Complex C
  Other components
   EJC/TREX
    110891379
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 110891379
NCBI-ProteinID: XP_021994769
Position
11:182319670..182325680
AA seq 202 aa
MANVADVDALDFEPDDDDLMDEDAAVDVDATSPRVSAHIPKLKSAITGGSVAAAAVKKTK
GRGFREETDAERNNRMSGRFDSLDSDGGPGPERSIEGWIMLVTGVHEEAQEDDLQNAFGE
FGEIKNLHLNLDRRTGFVKGYALIEYENYEEAEKAITTMDGGELLTQTVNVDWAFSKGPF
RRINNRRRSPHGRRSRSPRRRF
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcgaacgttgcagacgtagacgcactggatttcgaaccagatgacgatgatctaatg
gatgaagatgccgccgttgacgtcgatgcaacttcacctagggtttccgctcacataccg
aagcttaaatccgccatcaccggtggctccgtcgccgctgccgctgttaagaaaaccaaa
ggccgtggtttccgtgaagaaactgacgctgaacggaataatcgtatgtcaggtcgcttt
gattcgcttgattccgatggcggacccggtccagaacgatcaattgaagggtggattatg
ctggttaccggagtacatgaagaagcccaagaggatgacttacaaaatgcgtttggagag
ttcggtgagattaagaacttgcatctgaatctcgatcgacgaaccggttttgtgaagggg
tatgcgctgatcgaatacgaaaactatgaggaagcagagaaagctataactacaatggac
ggaggtgaactgctgactcagacggtcaatgtcgattgggctttcagcaaaggtcctttt
agaaggataaataataggagaagatcacctcatggccgtcgatcaagaagtccaaggagg
agattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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