KEGG T05101: 110893937

Helianthus annuus (common sunflower): 110893937

Entry

110893937         CDS       T05101

Name

(RefSeq) protein CHROMATIN REMODELING 5 isoform X1

K11367

chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]

Organism

han Helianthus annuus (common sunflower)

Brite

KEGG Orthology (KO) [BR:han00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110893937
   03036 Chromosome and associated proteins [BR:han03036]
    110893937
Transcription machinery [BR:han03021]
Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     110893937
Chromosome and associated proteins [BR:han03036]
Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     110893937
    SLIK complex
     110893937

SSDB

Motif

Pfam:

SNF2-rel_dom Helicase_C Chromo CHD1-like_C HDA2-3 ResIII DEAD CHDCT2 RPAP1_N

Other DBs

NCBI-GeneID:

110893937

NCBI-ProteinID:

XP_021996786

Position

12:complement(111177372..111193439)

AA seq 1676 aa
MAFFRNYTNATVSDGDLNDKRPGGSIERLENIIGNDDMETTSGMDKGFTTKIKSLNESVA
EDDGNLLNLTTNTTTTMRKTSGKWGSTFWKDCQPMHQGRGSDSGQESKSSSGYNVEDGSC
NDLSEVNKGQNVDEMLSDDYYELDGDEQNDSMHHKLVNNAAGYNSIPQRHVAAHNFLSRN
KSKASFGSEYVQDADFEDDEEEEDEDDPADADFDPDLVTTSVGRGKKVDDEDWDGVDLEE
DDNFEDDEFDISDDDIYKKARGMQRQKRGSKSSREPKPSTFLSRRKRGRTSFDDEEELND
SDDDFEEDFKSTRRKGHPRKDTTKASGRINEVRTSTRSVRKVSYVESDESEEHDEDVKRK
THKDEMEEEDGDSIEKVLWHQPKGMAEEAARTNKSTEPLLLNHLFDTEPDWYDTEFYIKW
KGQSHLHCQWKSFSELQNLSGFKKVINYTKKVMEEIKHRRAVSREEIEVIDVSKEMDLDL
IKQNCQVERIIADRLSKSLEVPEYLVKWQGLSYAEATWEKIDDIAFAQAAIDEYKTREAA
LAAAQGKMVDFQRRKSKASLRKLDEQPDWLKGGKLRDYQLEGLNFLVNSWRNDTNVILAD
EMGLGKTVQSVSMLGFLQNSQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNMIVYVGTRA
SREVCQQYEFFSDKNTGGTTKFDALLTTYEVLLKDKTVLSTIKWNYLMVDEAHRLKNSEA
SLYTTLKEFRTKNKLLITGTPLQNSVEELWALLHFLDSDKFNSKDEFVQNYKNLSSFNEN
ELANLHMELRPHILRRVIKDVEKSLPPKIERVLRVEMSPLQKQYYKWILERNFHDLNKGV
RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGITGSSKLERVILSSGKLVILDKLL
DRLHETNHRVLIFSQMVKMLDILADYLSIKGFKYQRLDGSTKSEVRHQAMEHFNAPGSDD
FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKS
VEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGSGFDKNELSAILRFGAEELFKED
RNDEENKKRLLSMDIDEILERAEKVEQKGAEGEPGNELLSAFKVANFCSAEDDGTFWSRW
IKPEAIAHADEALAPRAARNSKSYAEVIPPERNNKRKKKGIEFQDKGMKRRKADYSSYQT
PAIEGASAQARGWSYGTLPKRDATRFFRAVKKFGNDSQISLIATEVGGCVEAAPVEAQVE
LFDALLDGCREAVNAGSLDAKGPMLDFFGVPVKADDLLNRVEELQLLGKRINRYNDPISQ
FQALMYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEKIRMDEKLGLLKKIAPVELQH
HETFLPRAPQLKERASQLLEMELASVGGKSFGNKGGRKGSKRQQKDHPPNNPTFRGKGKQ
VKPGGSPVTNGKSKMTRGKKKEALVKEEGEMSDTEEVYEQFKEVKWMEWCEDVLTQEKKT
LERLHRLQTTSADLPKEKVLSRIRNYLQLLGRKIDQIVTDHEQDPYKQERMTTRLWNYVS
TFSNLSGGKLQQIYSKLKQENEVAAGVGTSHINAGGSRNQSSSALLNNNKGGLDTAKFEA
WKRRRRAESDPNTTAHLQQRPSFSSPDPGLGILGPAPSHNSRPTRQSAFGPKQGFT

NT seq 5031 nt +upstreamnt +downstreamnt
atggcgttttttagaaactatacaaatgcaacagtttcagatggtgatttgaatgacaag
aggccaggtggaagtatagagagactcgagaacatcataggaaacgatgatatggaaaca
acttcgggtatggataaagggtttacgacaaagattaagtcactaaatgagtcagtggct
gaggatgacggtaacttattgaatttaacgactaatactactactactatgaggaaaaca
tctgggaaatggggttcgacattttggaaggactgtcaaccaatgcatcaagggcgtggg
tctgactcagggcaggaatcgaaaagtagttctggttataacgttgaagatggatcatgc
aatgatttgtcagaagtaaataaaggtcaaaatgttgatgagatgttgtctgatgattat
tacgagctggatggagatgagcaaaatgattcgatgcaccacaagttagtaaacaatgca
gctggttataattcaataccacagcggcatgttgccgcacataactttttgtctagaaac
aagtcaaaagcttcttttgggagtgagtatgtccaggatgctgattttgaagatgatgag
gaggaagaagatgaagatgaccctgcagatgcagattttgaccctgatctagttacaaca
agtgttggaagagggaagaaggtagatgatgaagactgggacggtgtggatttagaggaa
gatgataactttgaggatgacgaatttgacatctcagacgacgatatttataagaaagca
agaggcatgcaaaggcagaagcgtggttcaaagtctagtagagaacctaaaccgtcaaca
tttttgagtcggaggaagagaggtagaacatcatttgatgatgaagaagaattaaatgat
tcagatgatgatttcgaagaggacttcaaaagtacaaggagaaaaggtcatcctcgcaaa
gacactacaaaagcttctgggaggatcaatgaagttagaacttcaaccagatctgtgcgc
aaagtatcgtatgttgaaagtgacgagagcgaagagcatgatgaagatgtcaagagaaag
acccacaaggatgagatggaagaggaagatggtgactccattgagaaggtgctctggcac
cagccaaagggcatggcagaagaagctgcgcggaccaacaaatctacggagcctctattg
ttgaaccatttatttgacacagagccagattggtatgatactgaattctatatcaaatgg
aaaggccaatcacatttgcattgtcaatggaaatcattttctgaactacaaaatctgagt
ggctttaagaaggttataaactacactaaaaaagttatggaggaaataaagcataggaga
gcggtatctcgtgaggagattgaggttattgatgtgagcaaggagatggatttggatctt
atcaagcagaattgtcaggtcgaaagaataattgctgatagacttagcaaaagcttggaa
gtgccagagtatttggttaagtggcaaggactctcttacgccgaagccacatgggagaag
attgatgatattgcttttgcacaagcagcaattgatgaatataagactagagaagctgcg
cttgcagctgcacaaggaaaaatggtagatttccagcgaagaaagagtaaagcaagtttg
agaaaacttgatgaacaacctgattggttaaaaggcgggaaactgagagactatcaactt
gagggattgaattttcttgttaatagttggagaaacgatacaaatgttatattagctgat
gaaatgggtcttggaaaaactgttcagtcggtttctatgcttggttttctccagaactca
caacaaattcatgggccttttcttgttgttgttcctctatcaactctgtcaaattgggct
aaagagttcagaaagtggcttcctgatatgaacatgattgtatatgttgggactcgtgca
agtcgagaggtttgtcagcaatatgaatttttctctgataagaacactggtggcactacg
aaatttgatgcactattgactacctatgaagttttactaaaggacaagacagtgctatca
acaattaagtggaattatcttatggttgatgaagcacataggttaaaaaacagtgaagca
tcattatatacaacactcaaggaattcagaacgaaaaacaagcttcttattactggcact
cccctgcaaaatagtgtggaagaactatgggcgttgcttcactttcttgactcagataaa
ttcaacagcaaggatgaatttgttcagaattacaagaaccttagttcatttaatgaaaat
gagcttgctaaccttcatatggagttacggcctcacattttgcgaagagttataaaggat
gtggagaaatcattgcccccaaagattgagcgtgttcttcgggttgagatgtctcctcta
cagaagcagtattacaagtggattttggaacgcaattttcatgacttgaacaaaggtgta
cgtggaaatcaggtttcccttttaaacattgtggttgagttgaagaaatgttgtaatcat
ccattcctttttgagagtgctgatcatggttacggtggggactctggaattactggtagc
agtaaactggagcgggtaattcttagtagtggaaagctagttatcctagataagcttctt
gacaggctgcatgagaccaatcatcgtgttctaatattttcacagatggttaagatgttg
gatatattagcagattacttgtcaattaagggattcaagtatcagagactcgatggaagt
acaaagtctgaggtgcgtcaccaagctatggagcattttaatgcaccaggcagtgatgat
ttctgcttccttctttctactcgtgctggtggtttaggaatcaaccttgcaaccgcagat
acagtcatcatatttgactcggactggaatcctcaaaatgatctgcaggcaatgagcaga
gctcatagaatcggacaacaggaggttgttaatatatataggtttgtgacaagcaagagt
gttgaggaagacatcttggaacgtgcaaaaaagaagatggtactcgaccatttggttatt
cagaaactaaatgctgaaggaaggttggagaagaaagaagcaaaaaaagggagtggtttt
gacaagaatgagttatcagctattttgagatttggggcagaggaactgttcaaggaagat
agaaatgatgaagaaaacaaaaagcgtcttctaagcatggatattgatgaaattcttgaa
agagcagagaaggttgaacagaaaggagctgaaggagaacctggaaatgaattgctgagt
gcatttaaggttgcaaatttctgctctgctgaggatgatggaactttctggagtcgttgg
ataaaacctgaagccattgcacatgctgatgaagctttagctccacgggctgcaaggaac
agcaagagttatgctgaggtcatcccacctgaaagaaataacaaaaggaaaaagaagggt
attgaatttcaagacaaaggtatgaagcgtcgaaaggctgattattcaagttatcaaact
ccagcaattgagggagcctctgcccaagcaaggggttggtcatatggtaccttgcctaag
agagatgccacacgtttttttcgtgcggttaagaagtttggaaacgacagccaaattagc
ttaatagcaactgaggttggtggttgtgtcgaagctgctccagtagaggcacaggtggag
ctttttgatgcattactagatggttgtagagaagcggttaatgcaggaagtctggatgcc
aaggggccaatgttggatttttttggtgttcctgtaaaggctgatgacctcttaaaccgt
gttgaagaacttcaactccttggaaagcgcattaaccgatacaatgatccaatctcacag
tttcaggctttgatgtacctcaaacctgcaacttggtctaaaggttgtgggtggaaccag
aaggatgacgcgaggttgctactagggatccattatcatggatttgggaactgggaaaag
ataaggatggatgaaaagctcggtcttttgaagaagattgctccagttgagcttcagcat
catgaaacattcctgccacgagctcctcagttgaaagaacgcgcctctcaacttcttgaa
atggaacttgcgtctgttggtggtaagagttttgggaacaaagggggtcggaagggttct
aaaaggcagcagaaggatcatccacccaacaatcctactttccgtgggaaaggcaaacag
gtgaaaccaggtggatctcctgtcacaaacggtaaatcgaagatgacacgtgggaagaag
aaagaggctttggttaaagaggaaggtgagatgtcggacactgaagaagtttatgaacag
tttaaggaagtgaaatggatggaatggtgtgaagatgtcttgactcaagagaaaaagaca
cttgagcgccttcacaggttacagacgaccagtgccgatcttcctaaagaaaaggttctt
tctagaatcagaaattatctacagcttcttgggcgaaagattgatcagattgtcaccgac
catgagcaggatccgtacaagcaagagaggatgacaacacggctgtggaattacgtctca
accttttcaaacttatcgggtggtaaacttcaacagatatattccaaactcaagcaagaa
aacgaggttgcagccggagtgggtacttcccatatcaacgcaggaggttctagaaatcaa
tcatcatctgcattacttaacaacaacaaaggtggccttgatacagcaaaatttgaagca
tggaaaaggaggcgacgggctgaatctgacccgaatacaactgcccatttacaacaacga
ccatccttcagctcgcctgacccgggtttgggaattcttggacccgcgccatctcacaat
agtagacccacacgccagtctgcttttggtccaaaacaaggtttcacatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (57)   

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