KEGG   Herpetosiphon aurantiacus: Haur_3679
Entry
Haur_3679         CDS       T00614                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hau  Herpetosiphon aurantiacus
Pathway
hau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Haur_3679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hau03019]
    Haur_3679
   03110 Chaperones and folding catalysts [BR:hau03110]
    Haur_3679
   03029 Mitochondrial biogenesis [BR:hau03029]
    Haur_3679
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hau04147]
    Haur_3679
Enzymes [BR:hau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Haur_3679
Messenger RNA biogenesis [BR:hau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Haur_3679
Chaperones and folding catalysts [BR:hau03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Haur_3679
Mitochondrial biogenesis [BR:hau03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Haur_3679
Exosome [BR:hau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Haur_3679
  Exosomal proteins of other body fluids (saliva and urine)
   Haur_3679
  Exosomal proteins of breast cancer cells
   Haur_3679
  Exosomal proteins of colorectal cancer cells
   Haur_3679
  Exosomal proteins of bladder cancer cells
   Haur_3679
SSDB
Motif
Pfam: Cpn60_TCP1 Radical_SAM
Other DBs
NCBI-ProteinID: ABX06315
UniProt: A9B6A4
Position
4621519..4623162
AA seq 547 aa
MAKQVAFNEEARRALKRGVDVVADAVKTTLGPRGRNVAIDKKFGSPTVTHDGVTVAKEIE
LKDPFENMGARLLVEAATKTNDVAGDGTTTATVLAQAIVHEGLRQVAAGANSMMIKRGLD
KGTAVLLQAIRDLAKPVNDRTDISSVATISAADSSIGDLIAEVMDKVGKDGVITVEEGKG
LGYETEYTEGMQFDRGYISAYFVTNSDRMESDLEDPYILITDKKISSIQEILPVLEKVLQ
FTKNFVIIAEDIDGEALPTLVLNKLRGTINVLAIKAPGFGDRRKAMLQDIAILTGGTVIS
EEIGRKLDSATVEDLGRARRVIANKDETTVIEGRGDEDAIKARIEQIRAQIETTTSDFDR
EKLQERLAKLAGGVAVLKVGAATEPELKERKHRVEDALSTARAAVEEGIVPGGGIALLSV
LPALDSVVPANQDEKAAVLILRRALEEPIRQLARNAGEDGAVIIDTVRRLQKEKGDSTLG
YNVITGEYGSMVEMGIIDPAKVTRSALQNAVSIASMILTTDALVADIPEKEAAPAPGGMG
GMGGMDF
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcaaagcaagttgcttttaatgaagaagcccgccgcgcactcaaacgtggcgtggac
gtggttgcagatgcagttaagacgaccttgggcccacgcggtcgcaacgtcgctatcgat
aaaaaattcggctcaccaaccgtaacccacgacggcgttaccgttgctaaagaaatcgaa
ttaaaagacccatttgaaaacatgggcgctcgcttgttggttgaagccgcaaccaaaacc
aacgatgttgctggtgacggtaccaccaccgccaccgttttggctcaagcaattgtccac
gaaggcttgcgccaagtggctgctggcgctaactcgatgatgatcaagcgtggcttggac
aaaggcactgccgttttgttgcaagcaatccgcgatttggccaagccagtcaacgatcgc
accgacatctcaagcgttgccaccatctcagctgccgattcgtcaattggcgatttgatt
gctgaagtgatggacaaagttggcaaagacggcgttatcaccgttgaagaaggcaaaggc
ttgggctacgaaaccgagtataccgaaggtatgcaattcgatcgtggctacatctcagcc
tacttcgtcaccaacagcgatcgcatggaatcagatttggaagacccctacattttgatc
accgacaagaagatcagctcgatccaagaaatcttgccagtgctcgaaaaagtcttgcaa
ttcaccaagaacttcgtcattatcgctgaagatatcgacggcgaagccttgccaaccctc
gtgttgaacaaattgcgcggcacgatcaacgtgttggcaatcaaagctcctggcttcggc
gatcgccgcaaagccatgttgcaagatatcgccatcctcaccggtggtacggttatcagc
gaagaaattggccgcaagcttgatagcgccacggtcgaagatttgggccgcgctcgccgc
gtgattgccaacaaagacgaaaccacggttatcgaaggccgcggcgacgaagatgcaatc
aaagctcggatcgaacaaattcgtgctcaaattgaaaccaccaccagcgatttcgatcgc
gagaaactgcaagaacgcttggccaaattggctggtggcgtagcagtgctcaaagttggt
gctgcaaccgagccagaattgaaagaacgcaagcaccgcgtcgaagatgccctctcaacc
gctcgtgcagctgttgaagaaggtatcgtgcctggtggcgggattgccttgttgagcgta
ttgccagccttggatagcgttgtgccagccaaccaagacgaaaaagctgctgtcttgatt
ctgcgccgcgccttggaagaaccaattcgccaattggcccgcaacgctggtgaagatggt
gctgtgattatcgacaccgtgcgccgcttgcaaaaagaaaaaggcgattcaacccttggc
tacaacgtcatcactggcgaatatggctcaatggttgaaatgggcatcatcgacccagcc
aaggtaactcgctcggccttgcaaaacgccgtttcgattgcctcgatgatcttgaccacc
gatgctttggtcgccgatatcccagaaaaagaagctgctccagctcctggtggtatgggt
ggcatgggcggcatggatttctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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