KEGG   Halothiobacillus sp. LS2: A9404_04175
Entry
A9404_04175       CDS       T04441                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
haz  Halothiobacillus sp. LS2
Pathway
haz03420  Nucleotide excision repair
haz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A9404_04175
   03430 Mismatch repair
    A9404_04175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haz03400]
    A9404_04175
Enzymes [BR:haz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A9404_04175
DNA repair and recombination proteins [BR:haz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A9404_04175
   MMR (mismatch excision repair)
    Other MMR factors
     A9404_04175
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 AAA_22
Other DBs
NCBI-ProteinID: ANJ68272
UniProt: A0A191ZKA0
Position
complement(930953..933154)
AA seq 733 aa
MMANRILDPLNVAQREAVTSPSLATLILAGAGSGKTRVLTHRMAWLCEEQGLSPHSLLAV
TFTNKAAGEMRSRLSTLLNPTGDPASGVRVNGLWVGTFHGLSHRLLRQHFQEAKLPQTFQ
IIDSDDQLRLIKRLLREANLDDTRWPPKMVAGLINGWKEEGLRSQHLEASGDPLRDQVIQ
LYRSYEDVCQRGGLVDFTELLLRATELLRDHDVLRAHYQRRFKQVLIDEFQDTNGLQYAW
ARLLIGPENGIFAVGDDDQSIYGWRGARIEHIQNFSRDFSNTHLVRLEQNYRSTGHILDA
ANAIIARNQGRLGKNLWTEGERGAPIQYYLAFNELDEADFVARQIEQLVRDGLARSDCAI
LYRANALSRVFEEALIRAGLPYRIYGGLRFFDRAEIRDALGYLRLMANRGDDAAFERVVN
TPARGLGDKTIMQLRELARARQEPLWQAAQYAVAQGQLAPRASGSLTKFMQLIEGLSVET
ANETLADRVARVIEASGLRDLQQKDRDRERGEARLENLDELVSAARSFDFDPETAAGMSE
LDAFLSQTSLDAGDAQGAEWEDCVKLMTLHAAKGLEFPHVFLVGMEEGLFPHQMALDEPG
RLEEERRLCYVGITRAQKTLTLTSAESRRLHGRQMFPVPSRFLGELPPDLIHEIRPRASQ
SFQTRQAPSGLPPRPTTTEEGGWSIGQAVRHAKFGEGTIIDHEGSGASTRVLVNFGIEGS
KWLILSYANLTAI
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgatggctaacagaattctcgatcccctgaacgtcgcccaacgggaagcagtcaccagt
ccatccctggcgaccttgattttggccggtgccggttccggcaagacgcgcgtgctcacc
catcgcatggcctggttgtgcgaggagcaggggctgtcgccgcacagcctgctggcggtg
acttttaccaacaaggccgccggcgagatgcgcagccgcctgtccacgttgttgaatccg
accggcgatccggcctcgggcgtgcgcgtcaacggcctgtgggtcgggaccttccacgga
ctgtctcaccgcctgctgcgccagcacttccaggaggcaaagctaccgcagaccttccag
atcatcgattcggacgatcaactgcggctgatcaagcgattgttgcgcgaggcgaatctg
gacgatacgcgttggccgccgaaaatggtggcggggctgatcaacggctggaaggaggag
gggctgcggtcccagcatctggaggcgagtggcgatccattgcgggatcaggtcatccag
ttgtatcggtcctacgaggacgtctgtcagcgcggcggacttgtcgatttcaccgagctg
ctgctgagggccaccgagttgctgcgcgatcacgatgtcttgcgtgcgcactaccagcgc
cgcttcaagcaggtactgatcgacgaattccaggataccaacggcctgcaatacgcctgg
gcgcgtttgttgatcgggccggagaacggcattttcgccgtgggcgacgacgaccagtcc
atttacggttggcggggcgcacggatcgagcacatccagaatttttcgcgggatttttcc
aacacgcatctggtgcggctggagcagaattatcgctcgacaggccatatcctcgatgcg
gccaatgcgatcatcgcgcgcaatcaggggcggctgggcaagaacctctggaccgagggg
gagcgcggggcgccgatccagtactacctggccttcaacgagctggacgaggccgatttc
gtcgcgcgccagatcgagcagttggtccgcgatggtctggcacgcagcgactgcgccatt
ctctatcgggccaacgccttgtcgcgggtattcgaagaggccctgatccgtgccggactg
ccgtaccgtatctatggcggtctgcggttcttcgaccgggccgagatccgcgatgctctg
gggtatctgcgactgatggccaaccggggggacgatgccgccttcgagcgggtggtcaac
acgcccgcccgcggcctgggcgacaagacgatcatgcagttgcgcgaacttgcccgggcg
cgacaggaaccgctgtggcaggcggcgcagtacgccgtggcccaaggtcaactcgccccc
cgggcatccggatcgctgaccaagttcatgcaattgatcgagggcctgtcggtcgagacg
gcgaacgagactctggcggaccgggtggcgcgggtcatcgaggcgagcgggttgcgtgac
ctgcagcagaaggatcgggatcgcgaacggggcgaggcccgccttgagaacctggacgaa
ctggtcagcgccgcccggagtttcgatttcgatcccgagacggcggcgggcatgagcgag
ctcgatgccttcctgagccagacgagcctggatgccggcgatgcccagggcgccgagtgg
gaggattgcgtgaagttgatgacgctgcatgcggccaaggggctggaattcccccatgtc
tttctcgtcggcatggaggaggggctgtttccccaccagatggccctcgacgagccggga
cgcctcgaagaggagcgtcggctgtgttacgtgggcatcacccgcgcgcagaagaccctc
acgttgacttcggccgagtcccggcgcctgcatggccggcagatgtttcccgtgccctcg
cgatttctcggcgaactgccgccggatctcatccatgaaatccgtccgcgtgccagccag
agctttcagacccgtcaggcaccgtccggtctgccgccccgaccgacgacgacggaggag
ggcggctggtcgatcggtcaggccgtgcgtcacgccaagtttggcgagggaaccatcatc
gaccacgagggcagtggagccagcacgcgcgtgctggtaaatttcggcatcgaaggcagc
aaatggctgattctcagctatgccaatctgacggcgatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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