KEGG   Hirschia baltica: Hbal_1657
Entry
Hbal_1657         CDS       T00945                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
hba  Hirschia baltica
Pathway
hba02024  Quorum sensing
hba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Hbal_1657
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hbal_1657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hba03019]
    Hbal_1657
   03036 Chromosome and associated proteins [BR:hba03036]
    Hbal_1657
Messenger RNA biogenesis [BR:hba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Hbal_1657
Chromosome and associated proteins [BR:hba03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Hbal_1657
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: ACT59345
UniProt: C6XJQ0
Position
complement(1763798..1764055)
AA seq 85 aa
MSSDKKQNLQDTFLNAVRKDKVQLTIFLMNGVKLQGVVTWFDNFCVLLKGDGRPPQLVYK
HAISTIAPNSPVKLFTGDDGSSDEA
NT seq 258 nt   +upstreamnt  +downstreamnt
atgtcatccgataaaaaacaaaaccttcaagacaccttcctaaacgctgtacgtaaagac
aaagtccaattgactatattccttatgaatggggtcaagcttcagggcgtcgtcacatgg
tttgataacttttgtgtgttactaaaaggcgatggtagaccgccacaacttgtttacaaa
cacgctatttcgacaattgcaccaaatagtccggtaaaattatttactggtgatgatggc
tcttccgacgaagcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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