KEGG T00945: Hbal

Hirschia baltica: Hbal_1862

Entry

Hbal_1862 CDS T00945

Definition

single-stranded-DNA-specific exonuclease RecJ

Orthology

K07462

single-stranded-DNA-specific exonuclease [EC:3.1.-.-]

Organism

hba Hirschia baltica

Pathway

hba03410	Base excision repair
hba03430	Mismatch repair
hba03440	Homologous recombination

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:hba03410]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:hba03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:hba03440]

SSDB

Motif

Pfam:

DHH DHHA1 Peripla_BP_6

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1998170..1999999)

AA seq 609 aa
MSRSPFLDPSQDLDVEDTGPAFLGVEHSLTGRRWRVRPVDDEKATEISRRLSKPDLIGKL
LAGRGVTLDEADTYFSPTLKALFPDPSSFADMDAACEVILEALVSGRKCAVLADYDVDGG
TSAAILTKYFKAWDRELILYVPDRLTEGYGPSVEAFESLKEQGAELVMTVDCGAAAVEAL
EAAHSLGLDVVVLDHHLMQSEPPPAAAVVNPNRPDCKSGCGHMAAAGVVFVLTAGLNRLA
RQKSVAPAGGLPDPMKWLDLCALGTLCDMAPLKGVNRAFVNAGLKVLQRMDNVGLAALSQ
VSGVEAPKSVYHATFLLGPRLNAGGRIGDPWIAAKLLATEDRKEALALAERLQALNEARK
EIEAEILDEATRIAESRLVEKPDAGAIVVGGEGWHPGVIGIVAGRLKEKFHRPTIVIGWG
EELGPVAKGSGRSVAGVNLGNLIAKASKEGIILSGGGHAMAAGLSLEPSQLEAFRDYMEE
STAEAKKELEQARVLELDGLLSPASADGELLLSVDGAGPYGAGSPEPIFAMANVRSHNVR
RVGVDHLSFEILGEDGGKLRAIAFRAADADLGQAILSGQMMHLAGKLKPDEWRGAGKVQF
EVSDGFFSK

NT seq 1830 nt +upstreamnt +downstreamnt
atgtctcgttccccattccttgatccgtcgcaagaccttgatgtcgaagatactgggcca
gcttttttgggtgttgagcattctttgacagggcgacgatggagagttcggcctgttgat
gatgaaaaagccactgaaatttcgcgcagactctctaagccagacctgattgggaagcta
ctggctggtcgaggggtgactttggatgaggctgatacttatttttctccaactctgaag
gccctttttcctgatccttctagctttgctgacatggacgctgcttgcgaagtgatatta
gaggcattggtgagtggccgaaaatgtgcggtgcttgcagattatgatgttgatggtggt
acgtcggcggcaattttgacgaagtatttcaaagcttgggaccgagagctgattttatat
gttccagaccgcctaacggagggctatggcccttctgtggaagcgtttgaatcgctaaag
gaacaaggcgcagagcttgttatgactgtggattgtggagctgctgctgtagaagcacta
gaggcagcgcatagtctgggtttggatgttgtggtgcttgatcaccatttgatgcaaagt
gagcctccccctgcggcagctgttgttaatcccaaccgacctgattgtaagtcaggttgc
gggcatatggcggcggcgggagttgtgttcgtccttacagcgggattgaataggttggcg
aggcaaaagtcagtggctccagctggtggtttgcctgatccaatgaagtggctggacctt
tgcgcattaggtacattgtgtgacatggcaccgcttaagggcgttaacagagcatttgta
aatgcgggcttgaaggttttgcaacgcatggacaatgttggattggcagctttgtctcaa
gtatcgggcgttgaggcccctaaatccgtttatcacgcgacttttctacttggtcctagg
ctaaatgcaggcgggcgaatcggtgatccttggattgcggccaaattgcttgcgactgaa
gacagaaaagaagcgcttgcattagctgaacgacttcaggctctaaacgaagctagaaaa
gaaattgaagctgagattttagatgaagcaacacgaatcgccgaatcacgtctagtcgaa
aaacctgatgcaggtgccatagttgtgggcggcgagggatggcacccaggcgttatcgga
attgtggcgggacgtttaaaagaaaaatttcataggccaacaatcgttattgggtgggga
gaagagcttggccctgttgcaaaagggtctggtcgttctgtggctggtgtaaatttaggg
aatttgattgctaaggcgtctaaagagggaatcattctttcaggaggtggtcatgctatg
gcggcgggattgtcacttgaaccttcccaactggaagcttttcgagattatatggaagag
agcacagctgaagctaaaaaggaattagagcaggcgcgtgttctggagcttgatggatta
ttgtctcctgcgtcagcggatggagaattattgctctcagtggatggggctggaccatat
ggtgcaggttctccagagccgatatttgctatggcgaatgtgcggtcacacaatgtgcga
cgtgttggagtggaccacttaagctttgaaatattaggagaagacggtggaaaacttaga
gcaatagcgtttcgagctgcagatgctgatcttggccaagcgattctttcggggcaaatg
atgcatttggccggtaagttgaagcctgatgagtggagaggagccggaaaagttcagttt
gaggtgtcagatggttttttttctaaataa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-HBA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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