KEGG   Helicobacter bilis: XJ32_05200
Entry
XJ32_05200        CDS       T04788                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hbl  Helicobacter bilis
Pathway
hbl03420  Nucleotide excision repair
hbl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hbl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XJ32_05200
   03430 Mismatch repair
    XJ32_05200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hbl03400]
    XJ32_05200
Enzymes [BR:hbl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     XJ32_05200
DNA repair and recombination proteins [BR:hbl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XJ32_05200
   MMR (mismatch excision repair)
    Other MMR factors
     XJ32_05200
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 PcrA_UvrD_tudor eIF3_p135
Other DBs
NCBI-ProteinID: AQQ59586
UniProt: A0A1Q2LGM2
Position
complement(1099431..1101566)
AA seq 711 aa
MDILESLNDAQREAAIHVDNALLILAGAGSGKTKTLTTRLAYLLSIGIPAQNTLTLTFTN
KAAREMRERALKLIESMSIPVINTPLLCTFHKFGLLFLQRYIHLLARNSMFNVIDEDDKR
KIIRNIKKNSKNIAKELTPATLSSAISDYKNNAILPDIAKQSPNMIDAQVAKIYQKYEDY
LYANNLVDFDDLLLLPYRILYENETLRTQISNKYQYIMVDEYQDTNNLQASLLKLLCATH
ENLCVVGDDDQSIYSWRGANIENILDFDAQFENTKIVKLEQNYRSTEEILTIANNLISHN
TTRYDKILKATRHNGKKVQYIKSHDDKAEMKQIIESIQTLIAQGESYNDIAILFRLNALA
RNVEECFNRAKIPFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQPKRSIGE
KTFENIIAASTQYTSIYVAWKQGGLSSLKCHARLSEFFTLIESLRECLQLNPSEIPHFFK
TKIKLYADDIPTKDSESNEDRRKNMDELFATLLDFIECERGGDYASNEEIIQAFLNDIAL
SSSSDMEDSHNVLCMSVHNSKGLEFKHVFVIGMEQGLFPLMNFYEISIDSVDKNTQNLNE
ERRLAYVAFTRAKDTLTLSYAKERMRHGKYREYYPSQFLTECGVVSKQNAILKPEESDKC
VAGLKRGDCVQHKIFGFGRIESVRELGDNSTAMVNFGGTKRNILISFLTKA
NT seq 2136 nt   +upstreamnt  +downstreamnt
gtggatattttagaatcacttaatgacgctcaaagagaagccgccatccatgtagataat
gccttgcttatacttgctggggctggaagcggcaaaactaaaacgctaacaacaagactt
gcctatctcttaagtataggtatccccgcacaaaacacattaacattaacattcacaaat
aaagccgcaagagaaatgcgagagagagcattaaagcttatagaatcaatgagtattcct
gtgataaatacccccttgctttgcacctttcataaatttggattgcttttcttacaacgc
tacattcatttacttgcgcgtaattccatgtttaatgtcatagatgaagatgataagcga
aagataatacgaaatataaagaaaaatagcaaaaatatcgcaaaagaattaactcccgca
acactctcaagtgctatatctgattataaaaataatgcgatattgccagatattgcaaag
caaagcccaaacatgatagatgcacaagtcgcaaagatttatcaaaaatatgaagactat
ctttacgcaaataaccttgtagattttgacgacttattactgctaccttatagaatctta
tatgaaaatgaaactttacgcacacaaataagcaataaatatcaatatatcatggtagat
gaatatcaagatacaaacaacctgcaagcaagtcttttaaaacttctatgtgccacacat
gagaatctttgtgtagtaggcgatgatgaccaaagtatttatagttggcgtggtgcaaat
atcgaaaatatcctagactttgatgcccaatttgaaaatacaaagatagtaaagctagag
caaaactatcgcagcacagaagagattctaacaatcgcaaataatcttatatcacacaac
acaacacgatatgataagattctaaaagcaacaaggcataatggcaaaaaagtccaatat
ataaaaagccatgatgacaaagccgagatgaaacagattatagaatctatacagacactc
atagcacagggcgagagctataatgacattgcgatattattccgcttaaacgcacttgca
agaaatgtagaagaatgctttaatcgcgctaagattccattcaaaatggtaggcgttata
cgattttatgatagacaagagattaaagatgtgcttgcctatttgcgtttagccctaaac
cttgatgataacttttcacttgagcgaattatcaatcaaccaaagagaagtatcggcgaa
aagacatttgaaaatataatagccgcaagtacgcaatacacaagcatatatgtcgcatgg
aaacaaggcggattatcttcacttaaatgccatgcaaggctaagcgagttttttacatta
atagaatctttaagggagtgtttgcagcttaatccaagcgaaataccgcatttttttaaa
accaaaataaaactttatgcagatgatataccaacaaaagattctgaaagcaatgaggat
cgcaggaaaaatatggacgagctatttgcgactttgctagattttatagaatgtgagagg
ggcggggattacgctagtaatgaagagataatacaagcatttttaaatgatatagcatta
agctctagtagcgatatggaagattctcacaatgtgctttgcatgagcgtacataatagc
aaggggttagagtttaagcatgtatttgttatcggcatggagcaaggcttatttccatta
atgaatttttatgaaataagtatagattctgttgataaaaacacacaaaatcttaatgaa
gaacgaagacttgcctatgtagcctttacccgtgcaaaagatacacttacgctaagctat
gcaaaagagagaatgcgtcatggcaaatacagagagtattacccatcacaatttttaaca
gaatgtggtgtagtatcaaaacaaaatgcgatattaaaacctgaagaaagtgataaatgt
gtggctgggctaaaacgcggcgattgtgtccagcataaaatatttggctttggcaggata
gaatctgtaagagagctaggcgacaactcaaccgcaatggtaaattttggcggcacaaag
agaaatatccttatatcttttctcacaaaagcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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