KEGG   Hevea brasiliensis (rubber tree): 110654086
Entry
110654086         CDS       T05150                                 
Name
(RefSeq) DNA mismatch repair protein MSH7 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110654086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hbr03400]
    110654086
DNA repair and recombination proteins [BR:hbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110654086
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II AAA_29 Ku_PK_bind
Other DBs
NCBI-GeneID: 110654086
NCBI-ProteinID: XP_021665663
Position
Unknown
AA seq 1093 aa
MQRQKSILSFFQKPSPANQSSGAGDTINGQKLHFLAKQQKQEVTSSSEPEIHSHGSLDSS
LEIRGTDTPPEKVPRQILPGSFKQNESSGGSSLFSSIMHKFVKVDHKEKPLESFTDPEGL
TKEEAAPQHPEKDNAFSSNGAVDNGGIVLVRSNGDVPGPETPGVLPLVPRLKRIQEDGSK
FDGKNGLSLLNAGKRVKLLLDSTSPSKNHDGISDSTTKFEWLDPLRIRDANGRRPSDPLY
DKKTLYIPADALKKMSASQKQYWSVKSQYMDVVLFFKVGKFYELYELDAEIGHKELDWKM
TLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRIEQLETSDQAKARGANSVIPRKLVQV
VTPSTLTDGNIGPDAVHLLAIKEGNYGLDNGATVYGFAFVDCAALRFWVGSVNDDTSFAA
LGALLMQVSPREVIYESRGMSKEAQKALRKYSLTGSTTLQLTPVPPTSDFLDASEVRNLI
QSKGYLRGSSNPWNNALDSVMNHDTALCALGGLIDHLSRLMLDDVLRNGDIFPYQVYKGC
LRMDGQTLINLEIFNNNADGGLSGTLFKYLDNCVTSSGKRLLRKWICHPLKCVEGINNRL
NVVEDLMANSEIMLVVAQYLRKLPDIERMLGRVKASFQASASLVVLPLIGKKVLKQRVKV
FGSLVKGLRIGMDLLLLLEEEGKIMSLLSKNFTLPELSGSAGLGKFLAQFEAAVDSEFPN
YQNHDVTESEAETLSVLIELFIEKSAQWSEMIHAINCIDVLRSFAITASMSSGSMSRPVI
LPESKTAAFTQETRGPVLKIKGLWHPFALGENGGLPVPNDLHLGEDSGGYHPCTLLLTGP
NMGGKSTLLRATCLAVILAQLGCFVPGEKCVLSVVDVIFTRLGATDRIMTGESTFFIECT
ETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFCHLVEKVNCRLLFATHYHPLTKE
FASHPHVTLQHMACAVKSKSENYSEGDQDLVFLYRLASGACPESYGLQVAIMAGIPEMVV
DAASKAGQVMKKSIGESFNSSEQRSEFSTLHEDWLKTLLNVSQIGDCNFDNDDVYDTLFC
LWHEVKSSYQPCK
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgcagcgacagaaatcgatcctatcattcttccaaaaaccctcgccggccaatcagagc
tccggcgccggagacactattaacgggcagaaacttcatttcctggcaaagcagcagaaa
caagaggtcacctcttcgagtgaacctgagattcatagtcatggttcactggactcgtct
ctggaaattaggggaaccgataccccaccagagaaggtgccacgtcagattctccccggg
agcttcaagcagaatgagagtagcggtggttcttcacttttctcgagcattatgcataag
ttcgtgaaggtcgatcacaaagaaaagcctctggagagttttactgatccagaaggactc
accaaagaagaagcagctcctcaacatcctgaaaaggacaatgctttcagctccaatggg
gcagttgataatggaggcatagtacttgtcagaagcaatggtgatgttcctgggccagag
acaccgggtgtgctacctctagttcctcgtttgaagcgaattcaagaggatggttctaag
tttgatgggaagaatggtctttccttgttaaatgctggcaagagagtgaaacttcttctt
gattcaacatccccaagcaagaaccatgatggaatatctgattcaactaccaaatttgag
tggcttgaccctctgcgaattagggatgccaatgggagaaggcccagtgatcctctctat
gacaaaaagacactatatataccagctgatgcattaaagaaaatgtcagcatctcaaaaa
caatattggagtgtcaaatctcagtacatggatgttgttcttttctttaaagtgggaaaa
ttctatgaactttatgaactggatgctgaaattggccacaaggagctggattggaaaatg
acattaagtggtgtggggaagtgtcggcaggttggtatatctgaaagtgggattgatgat
gctgttgaaaagctggttgctcgtggatataaagttggacgaatagagcagttggaaaca
tctgatcaagcaaaagctaggggtgcaaattctgtaattccaagaaaattagttcaagtt
gtgacaccatctacattaacagatggtaacattgggcctgatgcagttcatcttcttgct
ataaaagagggaaattatgggctggataatggggcaactgtttatggatttgcttttgtt
gattgtgctgctttacgattttgggttggttctgtcaacgatgatacttcctttgctgct
ttgggggcattattgatgcaggtgtcacctagggaagttatatatgaaagcagaggcatg
tccaaagaagcacagaaagctctcagaaaatactcattaactggttcaacaacactgcag
ttgacaccagttccacccaccagtgatttcctggatgcttctgaagttagaaatttgatt
cagtccaagggttaccttagagggtcttctaacccatggaataatgcacttgacagtgta
atgaaccatgatacagccctatgtgctcttggtggacttattgatcatctgtccaggttg
atgttagacgatgttttgcggaatggagatatttttccctaccaggtttataaaggttgc
ctcagaatggatggacagactctgattaatcttgaaattttcaataataatgctgatggt
ggtttatcgggtacattgtttaaatatcttgataactgtgtgacgtcatctggtaagcgg
cttttaaggaagtggatctgccatccactgaaatgtgttgaaggcattaataataggctt
aatgtagtcgaggatctaatggcaaattcagaaattatgttagttgttgcacaatatcta
cgcaagcttccagatatagaaaggatgcttggacgagtcaaggcaagttttcaggcatca
gcttctcttgtagtactccccttaattggcaagaaagtgttgaaacagcgagtgaaagtg
tttgggtctttggtgaaaggacttcgaattggaatggatttattattgctcttagaggag
gaaggcaaaataatgtcattattatcaaaaaattttacacttcctgagctaagtggaagt
gctgggctcggcaaattccttgcccaatttgaagcagctgtggatagtgagttccctaat
taccagaaccatgatgtaacagagtcagaggctgaaacactatctgtgctgattgaatta
tttattgagaaatctgcgcaatggtctgaaatgatccatgctatcaattgtatcgatgtt
ctaagatcttttgcgatcactgcaagcatgtcatctggatctatgtccaggcctgttatt
ttgcctgaatcaaaaactgctgcctttacccaagaaaccagaggacctgtacttaaaatt
aaaggtctgtggcatccatttgctcttggagagaatggaggactgcctgtcccaaatgac
ttgcacctaggtgaggattcaggtggctaccatccttgcactttactgctgactggacca
aatatgggtggaaaatcaacccttttgcgtgccacatgtctggccgttatactggctcag
cttggctgttttgtgcctggtgagaagtgtgttctctcagttgttgatgtcatcttcaca
cggcttggtgccactgatcgaattatgactggcgagagtacattcttcattgagtgcaca
gaaacagcgtctgttcttcaaaatgccacacaagattctcttgttcttcttgatgaacta
ggtcgaggaacaagcacttttgatggatatgccattgcatatgcagtgttctgtcatctt
gttgagaaagtaaattgccgattgctttttgcaacacactatcatcctctcacaaaggaa
tttgcgtctcatccacatgtcacactgcaacacatggcctgtgctgttaagtcaaaatca
gaaaactattccgaaggtgaccaggatctggtttttctatatcggcttgcctctggagca
tgccctgagagttatggattacaagtggctattatggctggaatccctgaaatggtggtg
gatgctgcttcaaaggctggccaagtgatgaaaaaatcaattggagaaagtttcaattca
agtgaacagagatcagagttctcaactctccatgaagattggctgaagactttactaaac
gtctcacaaattggagattgtaattttgacaacgatgatgtttatgacacgttgttttgc
ttgtggcatgaagtaaagagctcataccaaccgtgtaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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