KEGG   Helicobacter cetorum MIT 00-7128: HCW_04970
Entry
HCW_04970         CDS       T02032                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
hce  Helicobacter cetorum MIT 00-7128
Brite
KEGG Orthology (KO) [BR:hce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hce03016]
    HCW_04970
Enzymes [BR:hce01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     HCW_04970
Transfer RNA biogenesis [BR:hce03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    HCW_04970
SSDB
Motif
Pfam: Radical_SAM UPF0004
Other DBs
NCBI-ProteinID: AFI04261
UniProt: I0EMU2
Position
1070754..1072070
AA seq 438 aa
MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKVADLILINTCSVREKPERKLFSEI
GQFAKIKKPSAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAI
DYDESAYAFEFFEKKAEVRSLLNISIGCDKKCTYCIVPHTRGKEISIPMDLILKEAEKLA
SNGTKELMLLGQNVNNYGVRFSSEHAKVNFSDLLDKLSEIKGIERIRFTSPHPLHMNDEF
LERFANNPKVCKNIHMPLQSGSSAILKAMKRGYSKEWFLNRVEKLKSLVPHVGISTDIIV
GFPNESDEDFEDTMDVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSLRLEKLQNR
HKEILEEKAKLEVGKTHVVLIESMREKEGKIVGFEGRSDTGKFIEVTCKDEKKLGELVEV
EIVSNDGGRLQALVKNKA
NT seq 1317 nt   +upstreamnt  +downstreamnt
ttgaaagtttatattgaaaccatgggttgtgctatgaattctagggatagtgagcattta
ttaagcgagctatccaaactagactataaagaaactaatgaccccaaagtagcggatttg
attttaatcaatacttgtagtgtgcgtgaaaaaccagagcgaaaattattttcagaaatc
ggtcaatttgctaagattaaaaaacctagtgcaaaaattggcgtttgtggatgcacagca
agccatatgggagcagatatactcaaaaaagccccaagcgtgagctttgtgttaggggct
aggaatgtgtctaaaatctctcaagtcattcacaaagaaaaagccgttgaggtggctatt
gattatgatgaaagcgcgtatgcgtttgagttttttgagaaaaaggctgaagttaggtcg
ttattaaacatctctataggctgtgataaaaaatgcacttattgtattgttccgcacact
aggggtaaagagatttctattcctatggatttaatcttaaaagaagccgagaaacttgct
agcaatggcactaaagagctgatgcttttaggacagaatgtgaataattatggcgtgcgt
tttagtagtgagcatgcaaaagtgaattttagcgatttgttggataaattaagcgaaatt
aagggcattgaaagaataagattcacttcgcctcaccccttgcatatgaatgatgaattt
ttagagagatttgcgaataatcctaaggtgtgtaagaatatccacatgcccttacagagt
ggctctagtgcaatactaaaagccatgaaaaggggctatagcaaagagtggtttttaaat
agggtagagaaattaaaatccttagtgccccatgtgggcattagcactgatattattgta
ggctttcctaatgaaagtgatgaagactttgaagatactatggatgtgctagaaaaagtg
cgctttgacacgctctatagctttatttattcgccacgcccctttactgaagcgggagct
tggaaagaaagagtgcctttagaagtttcatctttaagattagagaaattacaaaatagg
cacaaggaaattttagaagaaaaagcaaaacttgaagtgggtaaaacgcatgtggtattg
atagaaagcatgcgtgaaaaagagggtaaaattgtaggttttgaagggcgtagtgatacg
ggaaaatttattgaagtaacttgtaaagatgaaaaaaaattaggcgagcttgtagaggtt
gaaattgtctccaatgatggggggcgtttgcaagcgcttgtaaagaataaggcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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