KEGG H.chejuensis: HCH

Hahella chejuensis: HCH_05959

Entry

HCH_05959 CDS H.chejuensis

Gene name glyA

Definition serine hydroxymethyltransferase

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway hch00260 Glycine, serine and threonine metabolism
hch00460 Cyanoamino acid metabolism
hch00670 One carbon pool by folate
hch00680 Methane metabolism
hch01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:hch00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:hch00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:hch00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:hch00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1
Cys_Met_Meta_PP Aminotran_5 OKR_DC_1 SapB_1
PROSITE: SHMT

Other DBs NCBI-GI: 83648600
NCBI-GeneID: 3838637
UniProt: Q2S9R4

Position complement(6088416..6089672)

AA seq 418 aa
MFTRDMTIASFDPDLWTAMQGETQRQEEHIELIASENYTSPRVMEAQGSALTNKYAEGYP
NKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANAAVYMALCKPGDVILGMS
LAHGGHLTHGASVSFSGRIYKAVQYGLNPETGEIDYEEVAKLARENKPKMIVAGFSAYSR
VIDWERFRAIADEVGAYLFVDMAHIAGLVAAGVYPSPVQIADVTTTTTHKTLGGPRGGLI
LAKANEELEKKLNFAVFPESQGGPLMHVIAAKAVCFKEAMTDEFKQYQAQVVKNARVMAD
TFIQRGYDIVSGGTDDHLFLVDLIKKDITGKDADAALGRANITVNKNAVPNDPRSPFVTS
GLRIGTPAITRRGMGEVEAKELTDWICDVLDDIENEETIQRVKQQVLELCKKFPVYKG

NT seq 1257 nt +upstreamnt +downstreamnt
atgtttacgcgtgacatgaccatcgcaagttttgatcctgatctttggaccgccatgcaa
ggtgaaacccagcgtcaggaagagcacatagagctgattgcatctgaaaactacaccagt
ccacgcgttatggaagcccagggctccgcgcttaccaacaagtatgcggaaggttatccc
aacaagcgctattacggcggttgtgaatatgttgatgtggttgagcaactggctatcgac
cgcgccaaagagctgttcggcgctgattacgccaacgtgcagccgcattctggctctcag
gcgaacgcagcggtatacatggcgctttgcaaacccggcgatgtgattcttggcatgagt
ctggcccatggcggccacttgacgcacggcgcctccgtcagcttttctgggcgtatctac
aaagcggtgcagtacggcttgaatccagaaaccggtgagattgattacgaagaagtcgcc
aagctggcgcgcgaaaataagcccaagatgatcgtggcgggcttttctgcatactcgcga
gtcattgattgggaacgcttccgcgctatcgcggatgaagtgggcgcatacttgtttgtc
gatatggcccatatcgccggtttggtggcggcgggcgtatatcccagcccagttcagatc
gcagacgtcactacgactacgactcacaaaaccttaggcggcccccgcggcggtctgatt
ctcgctaaagccaacgaagagttggaaaagaaactgaacttcgcagtcttcccagaaagt
cagggtggtcctttgatgcatgtgatcgctgcgaaagcggtttgcttcaaagaagcgatg
actgacgaattcaagcaatatcaggcgcaagtagttaaaaacgcccgggttatggcggac
acttttattcagcgcggatatgacattgtttccggtggtacggacgaccatttgttcctg
gtcgacctgatcaagaaagatatcaccgggaaagatgctgacgcagcattgggacgcgcc
aacattactgtgaataaaaacgcggtgcctaatgatcctcgctcaccattcgtcaccagc
ggcttacgcattggtacgcctgctattacccgtcgcggcatgggcgaagtagaagccaaa
gagctgacagattggatctgcgacgtgctggacgatatcgaaaacgaagagacgatccag
cgcgttaagcagcaagtactggagctgtgcaaaaagttcccagtatacaaaggataa

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (8)   
   PROSITE (1)   
All databases (24)

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