KEGG   Candidatus Hodgkinia cicadicola Dsem: HCDSEM_151
Entry
HCDSEM_151        CDS       T00938                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hci  Candidatus Hodgkinia cicadicola Dsem
Pathway
hci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCDSEM_151 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hci03019]
    HCDSEM_151 (groL)
   03110 Chaperones and folding catalysts [BR:hci03110]
    HCDSEM_151 (groL)
   03029 Mitochondrial biogenesis [BR:hci03029]
    HCDSEM_151 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hci04147]
    HCDSEM_151 (groL)
Enzymes [BR:hci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HCDSEM_151 (groL)
Messenger RNA biogenesis [BR:hci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HCDSEM_151 (groL)
Chaperones and folding catalysts [BR:hci03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HCDSEM_151 (groL)
Mitochondrial biogenesis [BR:hci03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HCDSEM_151 (groL)
Exosome [BR:hci04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HCDSEM_151 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   HCDSEM_151 (groL)
  Exosomal proteins of breast cancer cells
   HCDSEM_151 (groL)
  Exosomal proteins of colorectal cancer cells
   HCDSEM_151 (groL)
  Exosomal proteins of bladder cancer cells
   HCDSEM_151 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ACT34325
Position
112175..113785
AA seq 536 aa
MAKQLLFGVDARNKLVAGVNALADAVKVTLGPKGRNVVIERAFGPPRVTKDGVTVAKEIE
LGDKFENVGAQMVREVAAKTNDVAGDGTTTATVLAQAIIKEGVKAVATGANPVDLKRGID
LAVDEVAKILHSNSKRISSLEEIAQVATISANGERQIGLDIAEAMQRVGGDGVITVEEAR
AAATELEVVEGVQFDRGYLSPYFVTNQEKMVCELDNPYVLLYDRRISSLQALVPLLETVV
QTNRCLLVVADDVEGEALATLVVNKLRAGLRVAGVKAPGFGDRKKQMLEDVAVLTGAQVV
SEDIGAKLENVTLDKLGRARKVVITKDTTTIVDGGGSKVELRNRISQIKAQWQDSASDYE
RERLHERLARLSGGVAVIKVGGVTEAEVKEKKDRVEDALNATRAAVQEGIVAGGGVALLW
ASKAMAPPAVVGDERVGFDILNRALCAPAKQIAVNAGYDSSLVVGKVLESGSSSFGYDAQ
AGRYGDMLAMGIVDPVKVVRTALQDAASVAGLLITTEAIVAEAAKKDKPTLQSDAS
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggctaaacagcttttgtttggcgtcgacgccagaaacaagctggttgccggtgttaac
gcgctagccgacgccgtcaaagttacgttaggtccgaagggccgaaacgtggttatagag
cgcgcgtttgggccgccgcgagtaaccaaagacggtgtaactgttgctaaagaaatagag
ctgggggacaagtttgaaaacgtcggagctcaaatggttcgagaggttgcggccaaaacc
aacgacgtggccggcgacggcacgaccacggccacggtgctagcgcaagccataataaaa
gagggcgtgaaggctgtggcaactggcgccaaccccgtagaccttaaacgaggtattgat
ttggcagtcgacgaggtggccaagatcctgcactccaattcgaagcgaatttcaagctta
gaggagattgcgcaggttgcgactatatcggctaacggcgagcgccagattgggctagat
attgctgaagcgatgcaacgggtcgggggcgacggcgtcataacggttgaagaggcaagg
gctgcggccaccgagcttgaagtagttgaaggggttcagtttgacagaggctacttgtca
ccatactttgtaactaatcaagaaaagatggtgtgcgagctggacaacccctacgtgctg
ctgtacgacagaaggatttcaagcttgcaggcgctcgtgcccctgctagagacggtggtg
cagaccaacaggtgcttgctggttgtggccgacgacgtagagggtgaggcgctggccacg
ctggtggttaacaagcttagagctgggctgagggttgcgggcgtgaaggcgccggggttt
ggagataggaagaagcagatgttggaagacgtggccgtgctaacgggtgcgcaagtagtt
agcgaggacatcggagctaagcttgaaaacgtcacgttagacaagctggggcgggcgcga
aaagttgtgataaccaaagacaccacaaccatcgttgacggcgggggcagtaaggttgag
ctgaggaacaggatatcgcaaataaaggcccagtggcaggacagcgcgtccgactacgag
agggagaggctgcacgagagactggctaggctttcggggggggtcgccgttatcaaagtt
ggtggcgtcaccgaagctgaagttaaggagaaaaaggacagggttgaagacgcgctcaac
gccacgcgcgccgccgtgcaggaaggcatagttgctggagggggtgtggcgctgctgtgg
gcttccaaagctatggcgccgccggctgttgtcggagacgagcgcgtaggcttcgacatt
ttaaacagggcgctgtgcgcgcctgctaagcaaatagcagtaaacgctggctacgactcg
tcgcttgttgtgggcaaggtgctagagtccggctcgtcgtcgtttggttatgatgcgcaa
gccggccgctacggcgacatgcttgctatgggcattgtggacccagttaaggtggttagg
actgcgctgcaggacgcggcgtcagttgctggccttctaataactacggaagccatcgtt
gcggaggcggccaagaaagacaagcctacgcttcagtcagacgcaagctag

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system