KEGG   Helicobacter pylori HUP-B14: HPB14_01280
Entry
HPB14_01280       CDS       T02035                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
hcn  Helicobacter pylori HUP-B14
Pathway
hcn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HPB14_01280 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcn03400]
    HPB14_01280 (xseA)
Enzymes [BR:hcn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     HPB14_01280 (xseA)
DNA repair and recombination proteins [BR:hcn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HPB14_01280 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon SSB DUF6645
Other DBs
NCBI-ProteinID: AFI06967
Position
257862..259124
AA seq 420 aa
MHVLSVSEINAQIKALLETTFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKG
NANRLKFALKEGQEVVVFGAISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDEANKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINTLMQGEGCVQSV
VESIAYADSFHDTKNAFDAIVMARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA
SLKRLSFENKHHLNALKLEKLTIALENKTLEFLRFKKTLLEKISIQTLTSSFLQTKTERL
NALENALKLAHANLKLPQFGALVSKNHQAIELEALKRGDKIELSNEKARASAEILSVDRV
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatgtattgagcgtgagtgaaatcaatgcgcagatcaaagcccttttagaaacgact
tttttgcaagttagggttcaaggggaagtgagtaatttgactatccataaggtgagcggt
catgcgtatttttcgctcaaagacagccagtcagtcatcagatgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttggggct
attagcgtgtatgttccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gacataggttcattaaccctagctttagagcaattgaaagaaaaattacgccttaaaggc
tattttgatgaagccaataaattgcccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggacatgcaaaagatcgcttccaaacgatggccg
atgtgcgaattggtttgcatcaatactctaatgcaaggggagggctgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagttttcatgacacaaaaaacgcttttgatgcgatt
gtaatggctagaggtggggggagcatggaggatttgtattctttcaatgatgaaaaaatc
gctgatgctctgtatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttagtggcggatttaagggcttctacgccttcaaacgcgatggag
attttgctccctaatagcgatgaatggttgcaaagacttgatgggtttaatgtgaaattg
caccgctcttttaaaactttgctccatcaaaaaaaggcgcatttagagcatttagcggct
tctttaaaacgattgagttttgaaaacaagcaccatttaaacgctttaaaactagagaaa
ctaacaatcgctctagaaaataaaaccttagaatttttacgctttaaaaaaacgctttta
gaaaaaatctctattcaaacattgacaagctcttttttacaaactaaaacagagcgattg
aatgcactagaaaacgcccttaaactcgctcatgccaatttgaaattaccccaattcggg
gcgttggtgagcaaaaatcatcaagcgatagaattagaggcattaaaaaggggcgataaa
attgaattgagtaatgaaaaagccagagcgagcgctgaaattttgagcgtggatagggtg
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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