KEGG   Helicobacter cinaedi PAGU611: HCN_1045Help
Entry
HCN_1045          CDS       T02034                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
hcp  Helicobacter cinaedi PAGU611
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:hcp00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HCN_1045 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HCN_1045 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HCN_1045 (trpB)
Enzymes [BR:hcp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HCN_1045 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1058750..1060009)
Genome map
AA seq 419 aa AA seqDB search
MAKVFTESKNGYFGEAKGGKHAFGGQYVPEILLPALKELEKAYRGVFLSKGYKKELKSLL
KHFVGRPTPLIYAKNASKILNNEIYLKFEGLANTGAHKINNALGQVLLAKYMGKKRVIAE
TGAGQHGLATAAACAKLGLECEIFMGEIDIARQHPNVFNMELFGAKVQSVSSGSKTLKDA
VNEALREWSKRSEDSFYVLGSAVGPYPYPDLVRDLQSVISKELKKQTKAYFSGLPDIMIA
CVGGGSNAMGFFAHYLKENVKLIGVEAGGKGNGIGENAIRINAINASEGIAQGYKSLFLQ
DEDGQLSHTHSISAGLDYAGIGPQLAHLYEANRLHFTSATDDEALEALTFFAKNEGIIPA
LESSHALAALLKVCKENKGKKIIANVSGRGDKDIFITAKALTPTQWKNFLKDEIKRIES
NT seq 1260 nt NT seq  +upstreamnt  +downstreamnt
atggcaaaagtttttacagaatctaaaaatggttattttggtgaagcaaaaggtggcaaa
cacgcttttggcggacaatatgtcccagagattctgcttccagcactcaaagagttggag
aaagcctatcgcggcgtgtttcttagcaaagggtataaaaaggagctaaaaagtctgtta
aagcactttgtaggacgacccacaccgcttatttatgccaaaaatgcctctaagattcta
aataacgagatttatcttaagtttgaaggcttggcaaacacaggcgcacacaagattaat
aacgccctaggacaagtgcttttggcaaaatatatggggaaaaagcgcgtgattgctgaa
accggtgcgggacagcacggcttagccacagcggcggcttgtgcgaagcttgggctagaa
tgcgaaatctttatgggggagattgacatcgcaagacagcatccaaatgtctttaatatg
gagctttttggggcaaaagtacagagtgtcagtagcgggagcaaaacgcttaaagatgcg
gtgaatgaagcgttgcgagagtggagtaaaagaagcgaagatagcttttatgtgctaggc
agtgcggttggtccttatccttaccctgatcttgtacgggatttacaaagcgtgattagc
aaggagctaaaaaagcagacaaaggcttattttagcggactgcctgatattatgatagct
tgtgttggtggcggaagtaatgctatgggcttttttgcacattatttgaaagaaaatgtc
aagcttataggcgttgaggctgggggcaaggggaatggcattggcgaaaatgctattagg
attaatgctataaatgcaagtgaaggcatagctcaaggctacaaaagcctatttttacaa
gatgaggacgggcagcttagtcatacgcattctatttctgcagggcttgattatgctggg
attggaccgcaactcgcacatttatatgaagccaatcgtttgcattttacttccgctaca
gatgatgaagcactagaagcattaacattttttgctaagaatgagggcattatccccgct
ttagagtctagccacgcccttgctgcattacttaaagtatgcaaagagaataaaggcaaa
aaaatcattgcaaatgtgtcaggcaggggtgataaagatattttcatcacagcaaaagcc
ctaacaccaacgcaatggaaaaactttttaaaagatgagataaagcggattgagagctag

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