KEGG   Helicobacter cinaedi PAGU611: HCN_1046Help
Entry
HCN_1046          CDS       T02034                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
hcp  Helicobacter cinaedi PAGU611
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:hcp00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    HCN_1046 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HCN_1046 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    HCN_1046 (trpA)
Enzymes [BR:hcp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     HCN_1046 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1060147..1060944
Genome map
AA seq 265 aa AA seqDB search
MSKNKQTQLMGHIIAGYPTLELSMYAALGIAHAGANYLEVQFPFSDPNADGVVIEEACDK
SLAQGFKVTQGFSLLQALSSRLAHTQSKDKTTRLIVMTYANLIFRYGVEEFIKEAKECGA
WGMIVPDLPLESDEKLRILAQKYEINIISLIAPKTKASRIKKIAKASDEIVYIVSRSGTT
GSKTHIDSTLLEWLKFIRRFCKKPLALGFGINSNEQVEMLKNNVEIIVAGSYFVRFITEL
SKESKLTPQDYLHKLQEHTKALMGW
NT seq 798 nt NT seq  +upstreamnt  +downstreamnt
atgagtaaaaataagcaaactcagcttatggggcatattatcgctgggtatcctaccttg
gagctaagtatgtatgccgcgcttgggattgcccacgctggggcaaactaccttgaagtg
cagtttccattttctgatccaaatgccgatggcgtagtgattgaagaggcttgtgataaa
agcctagctcaaggttttaaagttacacagggcttttccttgcttcaagcactttcttca
cgcctagcccatacgcagagtaaggataaaacaacgcgtcttattgtgatgacttatgcg
aatttgatttttcgctatggtgttgaagagtttatcaaagaggcaaaggaatgtggggcg
tggggtatgatagtccctgatttgcctttagaatctgatgaaaaactccgcattttagct
caaaaatatgagattaacatcatctcgcttattgcccccaaaaccaaggcttcacggatt
aagaaaatcgctaaagcaagtgatgagattgtctatatcgtctctcgctctgggactacg
ggatcaaaaacgcatatagattctacacttttagagtggcttaagtttatacgcagattc
tgtaaaaagcctttggcactgggctttgggataaatagcaatgaacaggttgaaatgcta
aaaaataatgttgagattatcgtggctggaagctattttgtgcggtttatcaccgaatta
tctaaagaatctaagctcactccgcaggattatctccacaagttgcaagagcatacaaaa
gcccttatgggttggtag

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