KEGG   Helicobacter cinaedi PAGU611: HCN_1269
Entry
HCN_1269          CDS       T02034                                 
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hcp  Helicobacter cinaedi PAGU611
Pathway
hcp00470  D-Amino acid metabolism
hcp00550  Peptidoglycan biosynthesis
hcp01100  Metabolic pathways
hcp01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hcp00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HCN_1269 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HCN_1269 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    HCN_1269 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hcp01011]
    HCN_1269 (ddl)
Enzymes [BR:hcp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     HCN_1269 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:hcp01011]
 Precursor biosynthesis
  Amino acid ligase
   HCN_1269 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp
Other DBs
NCBI-ProteinID: BAM12480
UniProt: A0A809N8C2
Position
complement(1287960..1288997)
AA seq 345 aa
MKFDVIFGGVSFEHEISIVSAVALKKVLGERISNFIFLDSLHRFYLIPATLMKSKTFSSG
EYKKCTEIFLQRSSFVKKSLFGFKAIIPNTLISLIHGADGEDGSMSALLDFYHIPFIGPR
IESSVMSFNKALTKIYAQSRGVKVLDYEILTRNSPNPTLPYPLILKPSRLGSSIGVSVVN
KEDELEYAKDLAFEYDDSIVVECFKSGVKEYNLAGCKIGDEFRFSIVEEPSKKEMLDFEN
KYLDFSRTAQVLKADISQELEKQIQQNFAKLYENAFEGALIRCDFFVIDNEVYLNEINPI
PGSMANYLFEDFACVLESLAHNLPKKHSIKVSYKYIERIHHAKGK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaaatttgatgtaatctttggtggcgtgagctttgagcacgagattagcattgtgagt
gcggtggcgttaaaaaaggtgctaggggagagaatatcaaattttatttttttagattct
ttgcatagattctaccttattcccgcaacgctaatgaagtctaaaacttttagttcaggg
gagtataaaaaatgcacagagatttttttgcaaaggagttcatttgtaaaaaaatctctt
tttggctttaaggcgattatcccaaatacgcttattagccttatacacggagcagatggg
gaagatggcagtatgagtgcgttgcttgatttttatcatattccttttattggtccgcgt
atagaatctagtgtgatgagttttaacaaggctttgacaaagatttacgcacaatcaagg
ggcgtgaaagtgttagattatgagatactcactcgcaatagccctaatcccactttgccc
tatcctttgattttaaagccatctcgccttggaagctccataggtgtaagtgtagtaaat
aaagaagatgagctagaatatgctaaagatttagcatttgagtatgatgatagtattgtg
gtggagtgctttaaaagcggtgtgaaagaatataatttggctgggtgcaagataggtgat
gagtttagattctctatcgtagaagagccaagtaagaaagaaatgctagattttgaaaat
aaatatttggacttttctcgcacagcacaggttttgaaagctgatattagccaagagctt
gaaaagcagattcagcaaaattttgccaaactttatgaaaacgcttttgagggggcgttg
atccgttgtgatttttttgtgattgataatgaagtgtatttgaatgagattaatcccatt
ccggggtctatggcgaattatttatttgaagattttgcttgtgtgcttgaatctttggct
cataatttgccaaaaaaacattctatcaaggtaagctataaatatattgaacgcattcat
cacgcaaaaggaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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