KEGG   Helicobacter cinaedi PAGU611: HCN_1808Help
Entry
HCN_1808          CDS       T02034                                 

Definition
DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
hcp  Helicobacter cinaedi PAGU611
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcp00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    HCN_1808
   03420 Nucleotide excision repair
    HCN_1808
   03430 Mismatch repair
    HCN_1808
   03450 Non-homologous end-joining
    HCN_1808
Enzymes [BR:hcp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HCN_1808
DNA repair and recombination proteins [BR:hcp03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HCN_1808
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1791351..1792106
Genome map
AA seq 251 aa AA seqDB search
MLLSEFEKRQANSQWLVSEKLDGVRGLWNGQKMYFRSGKPMNLPSEFVKDFPPFALDGEL
YSPKLHFSQIISILKNPQKQNEILELKFYVFDVPHSAKDSLTQRLDELRTYLKSKPNVYI
EIIPQRLMQGQDSIDRELQAVVDNGGEGLVLRTPNMPYQKGRSKYDFKLKTRQDAECKVI
GHTQGKGKYDSMLGAIICEYNGKNFKIGSGLSDTLRHNPPPIGSIISFKFQGLTHNGTPR
FPTFWRIKQEE
NT seq 756 nt NT seq  +upstreamnt  +downstreamnt
atgcttttaagtgagtttgaaaaaagacaagcaaattctcaatggcttgtaagtgaaaag
cttgatggtgtgcgagggttatggaatgggcaaaagatgtatttccgcagtggcaagcca
atgaatctgccaagtgagtttgtgaaagattttccgccttttgcccttgatggtgagcta
tatagcccaaaactccacttctctcaaattatctctatccttaaaaatccgcaaaagcaa
aatgaaattttagagttaaaattttatgtttttgatgtgccgcattccgctaaagattca
ctcacgcaaaggcttgatgagctaaggacatatcttaagtctaagccaaatgtgtatatt
gagataatcccccaaaggcttatgcaagggcaggattctattgatagggagcttcaagcg
gttgtggacaatggtggagagggacttgtcttgcgaacgccaaatatgccctatcaaaaa
ggacgaagcaaatatgattttaagctcaaaacaaggcaggacgcggaatgtaaggtcata
ggacacacgcaaggtaagggtaagtatgattctatgctaggagcgattatttgtgaatac
aatggcaaaaactttaaaatcggcagtggcttgagcgatacgctaaggcacaatcctccg
cccattggttcaatcattagctttaagtttcaagggcttacacacaatggcactccacgc
ttcccaaccttttggcgtataaaacaagaagaataa

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