KEGG   Hippocampus comes (tiger tail seahorse): 109508484
Entry
109508484         CDS       T04969                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109508484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hcq03041]
    109508484
   03009 Ribosome biogenesis [BR:hcq03009]
    109508484
Enzymes [BR:hcq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109508484
Spliceosome [BR:hcq03041]
 Complex A
  U1 snRNP components
   U1 related factors
    109508484
 Complex B
    109508484
Ribosome biogenesis [BR:hcq03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    109508484
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 109508484
NCBI-ProteinID: XP_019714063
UniProt: A0A3Q3DVM5
Position
Unknown
AA seq 618 aa
MPGYSDRDRGRDRDRDRGYGGGPHRFGGGRGGGGGGGGGSKFGNPGDRLRKKHWNLDELP
KFEKNFYQEHPDVTRRPLQEVENYRRTKTITVKGRNCPNPIVNFHEASFPSYVMDVINKQ
NWTDPTPIQAQGWPLALSGNDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV
LAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL
EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED
FLKDYVQINVGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKR
RCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKF
VINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNVRQASDLISVLREANQAINPKLL
QMGEIRGGRSRGGRGGDFDRRDRYSSGRRDFGNFRDRDSSRGYDSGPNKSFSTNTQNGGY
GGNSGGANSFSSGYNGNGQSFNQQPASFPPQNNFQPQQNGGATQPPFPFPQPQPPQQHPP
QQHPPPLAPYQMAPQFPQ
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgccaggatattccgacagagatcgtggccgagacagggacagagatcgaggttacggt
ggcggccctcatcgttttggtggtggccgaggcggcggcggcggcggaggaggaggatcg
aagttcggcaaccccggtgaccgactgcgaaagaaacattggaatctggacgagcttcca
aagtttgagaagaacttttaccaggagcacccggacgtaacgaggaggcctttgcaagaa
gttgaaaattatagaaggaccaaaaccatcacagtgaaagggagaaactgcccgaatcca
attgtgaatttccacgaagcaagctttccatcgtatgttatggatgtcatcaacaagcaa
aactggacagacccaactcccattcaggctcagggctggcctttagcactgagtggcaat
gacatggttggcatcgcacagactggttctggcaaaacactctcatatctgttgcctgcc
atcgttcacatcaaccaccagcctttcctggagcgcggtgatggacctatttgcttggtg
ctggccccaactcgtgagctggcccagcaggtgcaacaggtggctgccgagtatggcaga
gcttctcgcctgaagtccacctgtatctacggaggagcccccaaggggccgcaaattcgt
gaccttgagcgaggtgttgagatctgcatcgcaactccaggcaggctcatcgacttcctt
gaagcaggaaagaccaacctgcgccgttgcacctacctcgtattggacgaggctgacaga
atgctggacatgggatttgaaccacagatcaggaaaattgttgaccagatcagacctgat
cgtcagacgctgatgtggagcgccacctggccaaaagaggtacgtcagctggctgaagac
tttctcaaagactacgtgcaaatcaacgttggggccctgcaactcagtgcaaaccacaac
atccttcagattgttgatgtgtgcaatgatggcgagaaagagaacaaactcattcgtttg
ctggaggaaattatgagcgagaaggagaacaagactatcatttttgtagagacaaagagg
cgatgcgatgacctgacaagaaggatgaggcgagacggatggccagcaatgggaatccac
ggagataagagccagcaggagagagactgggttcttaatgaatttaaatatggaaaggct
cccattctgattgctacagatgttgcatctcgtggtctagatgttgaggacgtgaaattt
gtcatcaactttgactaccccaacaactctgaggactatatccaccgcattggcagaacg
gcccgtagccaaaagactggcactgcctacaccttcttcactcccaacaacgtgaggcag
gccagcgacctcatctctgttctacgcgaggccaaccaggccatcaaccctaagctcctc
caaatgggtgaaatcagaggaggtcgttcaaggggaggcagaggtggtgattttgaccgc
agggatcggtattcatctggaaggcgagactttggcaattttagggacagggatagcagt
agaggctatgacagcggaccaaacaaaagctttagcacaaatactcagaatggaggctat
ggggggaacagcggtggcgctaacagttttagcagcggctacaatggcaatggacagtcg
tttaaccagcagccagcatccttcccacctcagaataactttcaaccccagcagaatggt
ggtgcgactcaacccccgttccccttcccccaaccacagccccctcagcagcatccgccc
cagcagcatccgcccccccttgcgccgtaccaaatggcgccacaattccctcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (63)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (84)   

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