KEGG   Hippocampus comes (tiger tail seahorse): 109514108
Entry
109514108         CDS       T04969                                 
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04137  Mitophagy - animal
hcq04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109514108 (vcp)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109514108 (vcp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109514108 (vcp)
   03009 Ribosome biogenesis [BR:hcq03009]
    109514108 (vcp)
   04131 Membrane trafficking [BR:hcq04131]
    109514108 (vcp)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hcq04147]
    109514108 (vcp)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109514108 (vcp)
Ribosome biogenesis [BR:hcq03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    109514108 (vcp)
Membrane trafficking [BR:hcq04131]
 SNARE
  SNARE associated proteins
   Others
    109514108 (vcp)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    109514108 (vcp)
Exosome [BR:hcq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109514108 (vcp)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 AAA_22 TIP49 AAA_14 RNA_helicase AAA_28 Vps4_C AAA_18 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 IstB_IS21 ATPase_2 AAA_7 ATPase DUF815 Bac_DnaA ABC_tran AAA_24 NB-ARC ResIII TsaE Zeta_toxin NACHT Sigma54_activat Viral_helicase1 SLFN-g3_helicase bpMoxR KAP_NTPase UFD1 Zot
Other DBs
NCBI-GeneID: 109514108
NCBI-ProteinID: XP_019722481
UniProt: A0A3Q2Y4S6
Position
Unknown
AA seq 806 aa
MASGGESKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPLPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISEDVNLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPLAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPNSTTGG
SGPSHGTGGSGTGPVFNENNDDDLYG
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcatcgggaggggaatcaaaaaatgatgacctagctactgcaattctcaaacagaag
aacaggcccaacagattgattgtggatgagtctattaatgaagacaacagtgttgtgtct
ctctctcagaccaagatggatgaactgcagctcttccgtggtgacacagtactgatgaag
ggcaaaaagagacgcgagactgtgtgcattgtgttgtctgatgatacatgctctgatgaa
aaagttcgaatgaacagggtggtccgcaacaacctgagggtccgactgggtgatgtcatc
agcattcagccatgtcctgatgtaaagtatggaaagaggatccatgttcttccaatagat
gacacagtagagggaatcactggcaacctgtttgaggtttatctcaagccatattttctt
gaggcttacaggcccattcgcaaaggtgatattttcctcgtccgaggagggatgcgcgcc
gtggaattcaaagtggttgaaactgatcctttgccctactgcatcgttgctcctgacact
gtcattcattgtgaaggcgagccaatcaggagagaggatgaagaggagtctttgaatgag
gttggctatgatgacattggtggagtgaggaagcagctggctcagatcaaagaaatggtg
gaacttccacttcggcaccctgcactgtttaaggccattggtgtcaagcccccacgtgga
atccttctctatggaccccctggaactggaaagaccttgattgccagggctgtggccaat
gaaactggagccttcttcttcctgatcaatggccctgagattatgagcaagctggccgga
gagagcgagagtaacctcaggaaggcctttgaggaagcagagaaaaatgctcctgccatc
atcttcattgatgagcttgatgctattgctcctaagagagagaagacccatggagaggtg
gagaggcgcattgtctcacagctgctgactctgatggatggcctcaaacagagagctcat
gtcatcgtcatggccgccacaaacagaccgaacagcatcgacccggctctgaggagattt
ggtcgttttgatcgggaagtggacattggcattccagatgccactggcaggctagagatt
ctccagattcacaccaaaaacatgaagcttgctgatgatgtggacttggaacaggtagcc
aatgagacccatggtcacgtgggcgcagatctggctgccctgtgctctgaggcggcactg
caagccatcagaaagaagatggacctgattgatctggaggatgagaccatcgatgctgaa
gtcatgaattctctcgccgtcaccatggatgacttcaagtgggctctgagccagagcaac
ccatcagctctcagagagacagttgtcgaggttcctaacattacttgggaggatattggt
ggactggaagatgtcaagagagagctgcaagagttggtacagtacccagtggagcacccg
gacaagttcctcaagtttggcatgaccccatccaagggcgtgcttttctatgggcctccc
ggttgtggtaaaactctgctggccaaagccatcgccaacgagtgccaggcaaatttcatc
tctatcaaaggaccagagttgctcaccatgtggtttggagagtctgaggcaaacgtcaga
gagatttttgacaaggctcgtcaagcggccccttgcgttcttttctttgacgagctggac
tccatagcaaaggctcgcggcggcaacgtcggagatggcggcggagcggccgaccgcgtc
atcaaccagatcctgaccgagatggatggcatgtccagcaagaagaacgtcttcatcatc
ggcgccacaaacagacccgacatcattgaccccgccatcctgagacctggacgtctggac
caactcatctacatccccctgcctgacgagaagagccgaatgagcatcctgaaggccaac
ctccgcaagagtcccatcagcgaggatgtcaacctggactacctggcgaagatgaccaat
ggcttctctggagctgacctcacagagatctgccagcgggcgtgtaaactggccatcagg
gagagcatcgaaaacgagatccgcagagagagggagaggcagaccaatcctttagccatg
gaggtggaagaagatgaccccgtgccagagatcaggaaggaccatttcgaggaggccatg
cgattcgcccgccgctccgtcagcgacaatgacatccgcaaatatgagatgtttgcacag
acgctgcagcagagtcgtggcttcggcagctttaggttccccaacagcaccacaggcggc
agcggtccaagccacggcacaggaggaagtggcacaggtcccgttttcaatgaaaataat
gacgatgacctttatggataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (40)   
   Pfam (40)   
All databases (123)   

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