KEGG   Hippocampus comes (tiger tail seahorse): 109518611
Entry
109518611         CDS       T04969                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109518611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hcq03000]
    109518611
   03021 Transcription machinery [BR:hcq03021]
    109518611
Transcription factors [BR:hcq03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109518611
Transcription machinery [BR:hcq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109518611
  RNA polymerase III system
    TFIIIB
     109518611
  RNA polymerase I system
    SL1/TIF-1B
     109518611
SSDB
Motif
Pfam: TBP Pap_E4
Other DBs
NCBI-GeneID: 109518611
NCBI-ProteinID: XP_019730172
Position
Unknown
AA seq 330 aa
MSDSSTSCLCVSSGPLCYGPLYSVLRGSCCESTPPCLDATLLSFPRTESHDLKVPLLHPP
PQSSLTMFVAVESRQLSENDRRLLAMQALCRTPDPVASFLPVLVDSQPPLPPPPPPPPGP
GSLPHASFSSSSSSGSSSSSSARRPAARWSAKPRTGPQIQNVTSSVKLGCDLDLEFIARN
SWNVQHLSTVFKSLVMKIRKPQTTARIFQSGILFCTGAKSEDESRVAARKFAFKILKLGY
PVRFLDFKVLNIGGTCKTFPINLEDLFLAHQDHCSYEPELFPALQYNFRPGMTASIFSSG
SISLVGAKTEDEFYRAFCTLDAILINFRRT
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtccgattcgtcaacgtcatgtctctgtgtgtcgtcaggacccctttgttacggtcca
ctttattccgtgctgcgtgggagctgctgtgagtcaacgccgccgtgcttggacgctact
ttgctctcatttccccgcacagagtcccacgatctaaaagtcccccttctccacccaccc
ccacaaagttctttgacgatgttcgtggcggtggaaagccggcagctgtcggagaacgac
cgcagacttttagccatgcaggccctgtgcaggacccccgacccggtggcctccttcctc
ccggtgctggtggactctcagcctccgctgccgccgccgcctcctcctcctcccggcccg
ggctcgcttcctcacgcctccttctcctcttcctcctcctccgggtcctcctcatcatct
tccgcgcgcaggcccgccgcccgctggagcgccaagccccgaaccggcccgcagattcag
aacgtgacgtcttcggtgaagctgggttgcgatctggacctggagttcatcgctcggaac
tcgtggaacgtgcagcacctgtcaacggtcttcaagtcgcttgtcatgaagatccgcaag
ccccagaccacggccaggatcttccagtccggaatccttttctgcacgggagccaagagc
gaggacgagtctcgggtggccgccaggaagtttgccttcaaaatcctgaagctgggctac
ccggtgcgcttcctggacttcaaggtgctcaacatcggcggcacctgcaaaacgttcccc
atcaacctggaggatctcttcttggcccaccaggaccactgcagttacgaaccggagctg
tttcctgctctgcagtacaactttcgtcccggcatgacggcgtccatcttttcctctggc
tccatctcactggtcggggctaaaacggaagatgaattctaccgagcattttgcaccctg
gatgccatcctgatcaacttcaggaggacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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