KEGG   Hippocampus comes (tiger tail seahorse): 109530541
Entry
109530541         CDS       T04969                                 
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109530541 (usp1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hcq01002]
    109530541 (usp1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcq04121]
    109530541 (usp1)
   03400 DNA repair and recombination proteins [BR:hcq03400]
    109530541 (usp1)
Enzymes [BR:hcq01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     109530541 (usp1)
Peptidases and inhibitors [BR:hcq01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   109530541 (usp1)
Ubiquitin system [BR:hcq04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    109530541 (usp1)
DNA repair and recombination proteins [BR:hcq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109530541 (usp1)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 109530541
NCBI-ProteinID: XP_019749923
UniProt: A0A3Q2Z0E4
Position
Unknown
AA seq 771 aa
MPGLQGEEDMASLVSPIKRSKLSLKFFQKKETKRALDFSEPQADDANSCDQVVPAQSLQP
SLPDDVPLSYEKRDVVLPFVGLSNGGNTCYLNSILQVLYHCPGLKEGIKSLYKLSKSNAK
PTEETKQSEEQAGDTPESFPAHIELLASFHSLIRSVEQLQSDFLLNTDSFSERELDTSPR
EVLKTLRQLNPMYEGYFQHDAQEVLQCILVYIQEACKTIRKDKKQEAIVTEVQVEHDSSW
GSESQRDINEDGQVPGKRKSDTEMGNAKKKPKSGESGVEEEQLLSAPVTRSKSKSFRDNA
VENTKDKAEEKDETKKVEEEGANDDEKTFKEADGRKKKRCKLGWLRPAEKQPSIMSMFRT
VGKLTSTFAKISTKAEQGNVGADEGQTKDEKKSESVIFPNGNGVQKAPPHQDGLDLMEHL
FHGQLVLRTRCLECESFSERREDFQDISVPVQEEQPSSLEDRSSVSPYPKPEKTLKWAIG
QFASVERISGEDKYFCDTCRHYAEAERSLLFDKTPEVVTIHLKRFSASSSEMDPYAGLSK
VNTPLQTPLTLSLEEWCTPRSSRKGHNYELFAVVMHSGVSIGSGHYTAYVRMSGLKDAKF
WLCEREQQNGSKEVVPDYDDGEVSVRRDASQQPASSFACGKPGSKKRPEGGVGLLGGQRS
QPDVEHEERVTSGGMKDESEQRKTLRHAKVELKKEAEAGEERGTTSREEEEASEQQALKH
LLEYEGKWLLFDDSEVHLVKEEDFIQACSPQTCSSSTPYLLFYKRIPESGH
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgcctggtctgcaaggcgaagaagacatggcctcgctggtgagccccatcaagaggagt
aaactgtctttgaagttctttcagaagaaggaaactaaacgagccctggatttctctgaa
cctcaagcagatgatgccaacagctgtgatcaggtagtgcctgcgcaatctctgcaacca
agcttgccggatgatgtcccactgtcatatgagaagagagatgtcgtgttgccgtttgtg
gggctcagcaatgggggcaacacctgctatctgaacagcatcttacaggtgctctatcac
tgtccaggcttaaaagaaggcatcaagtccttgtacaaattgtctaaaagcaacgctaaa
cccactgaagaaacaaaacaatctgaagagcaagcaggggatactcccgagtccttcccg
gcacacatcgagctcctcgcgagcttccacagtctgataaggtccgtggagcagctgcag
tccgactttctgctcaacaccgacagcttcagcgagcgagagctggacacgtcgcctcgt
gaggttcttaaaacactcaggcaactgaacccgatgtatgaaggctattttcagcatgat
gcccaagaggttctgcagtgcatcttggtttatatacaggaggcctgcaagactattagg
aaggataaaaagcaggaggccattgtgaccgaggtccaagtggaacatgacagcagttgg
gggtcagaatcccaaagagacatcaacgaggatggccaggtgcctggaaaaaggaaaagc
gacaccgagatgggaaatgccaaaaaaaagcccaagtctggagaatctggagtggaggag
gagcaactgttgagcgcaccggtcacgcgctccaaaagtaagtcatttcgtgataacgct
gtggaaaacaccaaggacaaagctgaagagaaggatgagaccaagaaggtggaagaagaa
ggggccaacgatgatgagaaaaccttcaaagaggctgatgggagaaagaagaaacgctgt
aaactgggctggctgaggcccgctgagaaacagccaagcatcatgtccatgtttcgcacc
gtcgggaagctcacctctacatttgccaaaatctcaacgaaagcggagcaagggaacgtt
ggagctgacgaaggccaaacgaaagatgagaagaaaagtgagagtgtcatctttccaaat
gggaacggagtccaaaaggcgccacctcatcaggacggcctagacctgatggagcacttg
ttccatggccagctggttctacggactcgttgtctggagtgtgaaagcttcagtgagagg
cgagaggacttccaggacatcagtgtccccgtgcaggaggagcaacccagcagcttggag
gatcgctcttcagtttctccatacccaaaaccagagaagaccctgaaatgggccattggg
cagtttgcgtcggtggagcgcatttctggagaggacaagtacttctgcgacacgtgtcgc
cattacgcagaggccgagaggagtcttctttttgacaaaacacccgaagtcgtcaccatt
cacttgaagcgcttctccgccagcagttcggaaatggacccgtacgccggtctttccaag
gtgaacacacccttgcagacgcccttgactttgtctctggaggagtggtgcacaccacgc
tcgtccagaaaaggccacaactacgagctctttgccgtggtcatgcacagcggcgtgtct
atcggcagcggccactacactgcctacgtccgcatgagtggcctcaaggatgccaaattc
tggctgtgcgaaagggagcagcaaaacggctccaaagaagtagtgccggactacgatgat
ggtgaggtctccgtcaggcgagatgcgagccagcaacctgcctcgagctttgcttgtggc
aaaccaggaagtaagaagcgtccggagggcggggtcggactcttgggtggccaacggagt
cagcccgacgtcgagcacgaagagagagtgaccagtggtgggatgaaagacgaatcagag
caaagaaaaactctacgacatgcaaaagtcgagctgaaaaaggaggcggaggctggagag
gagagagggacaacttcccgtgaggaagaggaggcctcggaacagcaggctttaaaacac
ctcctcgaatacgaaggcaaatggctgctgttcgatgactcagaagtgcatttggtcaag
gaggaagatttcattcaagcctgctcccctcagacctgctcctcttcaacaccctacttg
ctcttttataagcgaatccccgagtcaggacattaa

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