KEGG   Hippocampus comes (tiger tail seahorse): 109531923
Entry
109531923         CDS       T04969                                 
Name
(RefSeq) transcription elongation factor B polypeptide 2-like isoform X1
  KO
K03873  elongin-B
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109531923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcq04121]
    109531923
   03400 DNA repair and recombination proteins [BR:hcq03400]
    109531923
Ubiquitin system [BR:hcq04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     109531923
   Cul5 complex
     109531923
DNA repair and recombination proteins [BR:hcq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109531923
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 109531923
NCBI-ProteinID: XP_019752023
Position
Unknown
AA seq 120 aa
MDVFLMIRRHKTTIFTDAKESTSVYELKRIVEGILKRPPEDQRLYKDDMELEDMQTLGNC
GFTNQTARPQSPGTVGLAFRLSADDSFEQLRMEPFSTPPELPDVMKPQDSGSTGNEQAVQ
NT seq 363 nt   +upstreamnt  +downstreamnt
atggatgtgttcctcatgatccggcgtcacaagacgaccatcttcactgacgccaaagag
tccacatctgtatacgagctgaagcgcattgttgaaggcatcctcaagaggccacctgag
gaccagaggctctacaaggacgacatggagctggaagacatgcagacgctcgggaattgc
ggcttcaccaaccagacggcacggcctcagtcccccggcaccgtaggcttagctttccgg
cttagcgcagatgattcattcgagcagctgaggatggagccattctcaaccccgcctgag
ctcccggatgtcatgaagccgcaggactcgggcagcacaggcaatgagcaagccgttcag
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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