KEGG   Natronorubrum daqingense: BB347_15465
Entry
BB347_15465       CDS       T04679                                 
Name
(GenBank) replication factor A
  KO
K07466  replication factor A1
Organism
hda  Natronorubrum daqingense
Pathway
hda03030  DNA replication
hda03420  Nucleotide excision repair
hda03430  Mismatch repair
hda03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BB347_15465
   03420 Nucleotide excision repair
    BB347_15465
   03430 Mismatch repair
    BB347_15465
   03440 Homologous recombination
    BB347_15465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hda03000]
    BB347_15465
   03032 DNA replication proteins [BR:hda03032]
    BB347_15465
   03400 DNA repair and recombination proteins [BR:hda03400]
    BB347_15465
Transcription factors [BR:hda03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    BB347_15465
DNA replication proteins [BR:hda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    BB347_15465
DNA repair and recombination proteins [BR:hda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     BB347_15465
   MMR (mismatch excision repair)
     BB347_15465
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     BB347_15465
SSDB
Motif
Pfam: tRNA_anti-codon REPA_OB_2 CDC24_OB3 Ssb-like_OB
Other DBs
NCBI-ProteinID: APX97898
UniProt: A0A1P8RGW2
Position
complement(3198930..3200375)
AA seq 481 aa
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEVGESEVGGIADIE
PGMEEAKFVAKVISIGEVRTFERDGEDEDGRVVNVEVADETGSVRAAFWDEHAEAAIGEL
EEGQVLRIKGRPKEGYSGVEVSVDDVEPDPDTEIGDVQVADTHTVEALSLGLSNVNLVGI
VLDTGSVRTFDRDDGSEGKVSNLVLGDSTGRVRVTLWDEQAETATEIDPSTTVEVVDGYV
KDRDGNLELHVGNRGAVEEVDEEVEYVPESTPIEEIEIDQTVDIAGVVRSADPKRTFDRD
DGSEGQVRNIRVQDATGDIRVAMWGEKADIDIGPGDEVALGDVEIQDGWQDDLEASAGWQ
STITVLESDSETTSAESEDDGRDENAGLSSFAGDDDTEGANVTDAGSDTDGSSDDSAGSD
EPDAGEEIEFTGVVVQAGSPVVLDDGETTMSVETDTDVGLGEEITARGVVRDGTLDANDV
F
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgagcgacatcgagggcgtgtacgaagacctcgaggccgacgtctccctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcagatggggggactcgcggacgaggagacggcg
gcgatgctcgtcgctcacgaagtcggcgagagcgaggtcggcggcatcgccgacatcgaa
cccgggatggaggaagcgaagttcgtcgccaaagtcatcagcatcggcgaggttcggacg
ttcgaacgcgacggcgaggacgaggacggtcgcgtcgtcaacgtcgaagtcgcggacgag
accggctccgtgcgagccgcgttctgggacgagcacgccgaggccgccatcggagaactc
gaggaaggacaggtacttcgaatcaaggggcgaccgaaggaaggctacagcggcgtcgag
gtcagcgtcgacgatgtcgaacccgatccggacaccgaaatcggtgacgtacaagtcgcc
gatacccacaccgtcgaggcgctctcgcttggcctctcgaacgtcaatctcgtcggcatc
gtcctcgacaccggcagcgttcgcacgttcgaccgcgacgacggctccgaggggaaggtc
tcgaatctcgtcctcggcgattcgaccgggcgggtgcgcgtgacgttgtgggacgaacag
gccgagacggcgacggagatcgaccccagtaccaccgtcgaggtcgtcgacggctacgtc
aaggatcgggacgggaacctcgaactccacgtcggcaaccgcggcgcggtcgaagaagtc
gacgaagaagtggagtacgttccagagagtacgccaatcgaggagatcgaaatcgaccag
acggtggacatcgccggcgtcgtccgctcggccgacccaaaacgaaccttcgaccgtgac
gacggctccgaaggacaggttcgaaacattcgcgtgcaggacgcgaccggcgacatccgc
gtggcgatgtggggcgagaaggccgatatcgatatcggtccgggcgacgaggtcgccctc
ggcgacgtggagattcaggacggctggcaggacgatctcgaggcctccgctggttggcag
tcgacgatcacggtgctcgagtccgattcggagacgacgtccgcagagagcgaagacgac
ggtcgagacgagaacgcagggctgtcgtcgttcgccggtgacgacgacaccgagggggcc
aatgtgaccgatgcgggttcagataccgatggctcgagtgacgattccgctgggagcgac
gaaccggacgcgggtgaggaaatcgagttcaccggcgtcgtcgtccaggctggaagtccg
gtcgtcctcgacgacggcgagacgacgatgagcgtcgagaccgacaccgacgtgggcctc
ggcgaggagataaccgccagaggcgtcgtccgagacggaacgctcgacgcaaacgacgtg
ttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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