KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0220Help
Entry
HDEF_0220         CDS       T00911                                 

Gene name
holC
Definition
DNA polymerase III, chi subunit
Orthology
K02339  
DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
Purine metabolism
Pyrimidine metabolism
Metabolic pathways
DNA replication
Mismatch repair
Homologous recombination
Module
DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:hde00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    HDEF_0220 (holC)
   00240 Pyrimidine metabolism
    HDEF_0220 (holC)
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    HDEF_0220 (holC)
   03430 Mismatch repair
    HDEF_0220 (holC)
   03440 Homologous recombination
    HDEF_0220 (holC)
Enzymes [BR:hde01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HDEF_0220 (holC)
DNA replication proteins [BR:hde03032]
 Prokaryotic Type
  DNA Replication Elongation factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HDEF_0220 (holC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(228423..228875)
Genome map
AA seq 150 aa AA seqDB search
MKRATFYLMEHGDPIHGLSPEETLTCELSAQHWRAGKKIQILCEEKAQAVRLDDALWLYP
PDAFIPHHLSGEGPKQGAPVEMIWPDCLSHHSADLLINLLSECIDFVGRFTEIIDFVPYE
TTLKQLARARYAYYRQLGFHLITTSPPLSK
NT seq 453 nt NT seq  +upstreamnt  +downstreamnt
atgaaacgagccactttttacctgatggagcacggtgatccaatccatggattgtctcca
gaagaaaccttaacctgtgaattgtctgcccaacattggagggcaggcaaaaaaatacag
atcctctgtgaagaaaaagcccaagcggtacgattagatgacgccttgtggctttatccc
cctgatgcttttattccccatcatctttcaggagaaggcccgaagcagggcgcacctgtg
gaaatgatctggcctgattgcctatctcatcattccgctgatctgttgatcaatctgcta
tccgaatgtatcgattttgtgggccgctttactgaaatcattgattttgtaccctatgaa
acgaccttaaaacagttggcaagagcgcgatacgcttattatcgccaactcggttttcat
ttaatcaccaccagccctccattgagtaaataa

DBGET integrated database retrieval system