KEGG   Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_2327
Entry
HDEF_2327         CDS       T00911                                 
Symbol
ffh
Name
(GenBank) 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hde  Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde02024  Quorum sensing
hde03060  Protein export
hde03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hde00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HDEF_2327 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HDEF_2327 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HDEF_2327 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hde02044]
    HDEF_2327 (ffh)
Enzymes [BR:hde01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HDEF_2327 (ffh)
Secretion system [BR:hde02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HDEF_2327 (ffh)
  Eukaryotic Sec-SRP protein
   HDEF_2327 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 AAA_31 AAA_24 VirC1 AAA_30 DnaB_C cobW AAA_33 AAA_19 YqeC AAA_14 APS_kinase TsaE ParD_antitoxin
Other DBs
NCBI-ProteinID: ACQ68864
UniProt: C4K8Z5
Position
complement(2094126..2095487)
AA seq 453 aa
MFNNLTERLSRTLRNISGRGRLTEENIKTSLREVRVALLDADVALSVVRDFIQRVKKKAM
GHEINKSLTPGQEFIKIVKNEMTSAMGEFNTELNLATQPPAVILMAGLQGAGKTTSVVKL
GKFITEKQKKKVLLVSVDVYRPAAIKQLETLAQSVSIEFFPSHFEENPVDIVTQALKHAK
LKFYDVLIVDTAGRLHVDENMMNEIKQLHLSLDPVETLFVVDAMTGQDAANTAKAFNEVL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPERIASRILGMGDI
LSLIEDIETKVDKVQSQKLAEKLKKGAQFDLNDFLEQLKQMHNMGGMSSMLSKLPQMGQL
PDQVKSMMDDNLTTRMEVIICSMTKKERIKPDIIKGSRKRRIAAGSGTKIQDVNRLLKQF
YEMQGMMKKMKNGGLSKMMRGMKGMMPFNLFGG
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttaataatttaactgaaagattatcacgcacgctacgtaatatcagtggtcgtggc
cgactaacagaagaaaatattaaaaccagtctgcgcgaagtacgtgttgctttgttagac
gcagatgtcgctttatccgtggtacgcgattttattcaacgggtgaaaaaaaaagcaatg
ggccacgaaattaataaaagtttaacacctggccaggaatttataaaaattgtgaaaaat
gagatgacctccgcaatgggcgagttcaataccgaacttaatttagcgacgcaaccgcct
gcggtgatattaatggctggtttgcaaggggcgggtaaaacaaccagtgtcgtcaaattg
ggcaaatttatcactgaaaaacaaaagaaaaaagttttgctggtctcggtggacgtttat
cggcctgcggccatcaagcaattagaaacccttgcacaatcggtgagtattgaatttttt
ccttctcactttgaagaaaatcccgttgatattgtcactcaagctttaaaacacgccaaa
cttaaattttatgatgtcttaattgtggatacagcgggtcgtttgcatgttgacgaaaat
atgatgaatgaaatcaaacagctgcatttgtctcttgatcctgttgaaacgctttttgtg
gtagatgcaatgacaggtcaggacgccgcaaataccgctaaagcctttaacgaagtactt
ccactgacaggtgtcatcttaactaaagtggatggagatgctcgaggtggtgccgcatta
tctattcgacatatcacggggaaacccattaaatttcttggggtcggcgaaaaaacagag
gcactagaacctttttatcctgaacgaattgcttcccgaattttgggaatgggggatatc
ttatctcttattgaagatattgaaactaaagtggataaagttcagtctcaaaagctggcg
gaaaaactgaaaaaaggtgcccaatttgatttaaacgattttttagagcaactgaaacaa
atgcataacatgggagggatgagcagtatgttgagcaaattgcctcaaatgggtcaatta
cccgatcaagtcaaatccatgatggacgataatttaaccactcgcatggaagtcatcatt
tgttctatgaccaaaaaagaacgcattaaacccgatatcatcaaaggttctcgaaagcgg
cgtattgcagcgggctcgggtacaaaaatccaggatgtaaaccgtttgctgaaacaattt
tatgaaatgcaaggcatgatgaaaaaaatgaaaaatggaggattatctaaaatgatgaga
ggaatgaaagggatgatgccattcaacctttttggggggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (33)   

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