KEGG   Hartmannibacter diazotrophicus: HDIA_4128
Entry
HDIA_4128         CDS       T05217                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hdi  Hartmannibacter diazotrophicus
Pathway
hdi00300  Lysine biosynthesis
hdi00470  D-Amino acid metabolism
hdi01100  Metabolic pathways
hdi01110  Biosynthesis of secondary metabolites
hdi01120  Microbial metabolism in diverse environments
hdi01230  Biosynthesis of amino acids
Module
hdi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hdi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HDIA_4128 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HDIA_4128 (dapF)
Enzymes [BR:hdi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HDIA_4128 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase PhzC-PhzF
Other DBs
NCBI-ProteinID: SON57669
UniProt: A0A2C9DBW7
Position
1:complement(4485430..4486404)
AA seq 324 aa
MKRLFRQHLRFAPKIRHECSNVQPFFRQRAQSNERQVVTGIPFAKMNGIGNEIVVLDLRD
SDLKVSPEAARAIAATPGAHFDQLMVLYPARTPGSDAAMTIFNIDGSESEACGNGTRCVA
MRLFEEGAKDRLVLETRAGLLPVRKTDDGQFTVGMGKPKFGWQDIPLAEPFHDTRYIELQ
IGPIDAPILHSPSVANIGNPHAIFWVDDVEAYDLARFGPLLENHPIFPERANISLAQVLS
PDHIRVKVWERGAGLTKACGSAACAVAVSAARTKRTGRKVLVSLPGGDLFIEWRDDDQIL
MTGPAELEHIGELPAETFEDTAAA
NT seq 975 nt   +upstreamnt  +downstreamnt
atgaagaggctcttccgtcaacacttgcgctttgccccaaaaatccgacatgaatgcagc
aacgtgcagccgttcttccggcagcgcgcacagagcaatgaaagacaggtcgtgaccggc
attcccttcgccaagatgaatggcatcggcaatgaaatcgtcgttctggatctccgcgat
tcggacctcaaggtgtcccctgaggccgcgcgcgcgatcgcggcaacgcccggcgcgcat
ttcgaccagctcatggtgctctatccggccaggacgcccggcagcgatgccgcgatgacg
atcttcaatatcgacggttcggaatcggaggcctgcggcaatggcacacgctgcgttgcc
atgcggctttttgaggaaggcgcgaaggatcggctggtgctggagacgcgcgcgggcctg
ctgccggtgcgcaagaccgacgatggccagttcaccgtcggcatgggcaagccgaagttc
ggctggcaggacattccgctcgccgaacctttccacgacacgcgctatatcgaattgcag
atcgggccgatcgatgcgccgatcctgcattcgccgtcggtcgccaatatcggcaatccg
cacgcgatcttctgggtcgacgacgtcgaggcctatgaccttgcccgcttcgggccgctt
ttggaaaaccatccgatcttcccggagcgggcaaatatctcgctggcgcaggtgctctcg
cccgaccatatccgcgtgaaggtgtgggagcgcggcgcagggctgacgaaggcctgcggc
tcggcggcctgcgcggtcgcggtgtcggcggcgcgcacgaagcggaccggccgcaaggtg
cttgtctccctgccgggcggcgatctcttcatcgagtggcgcgacgacgaccagatcctg
atgacgggaccggcggagctcgaacatatcggcgagctgccggcggagacgttcgaagat
actgctgcggcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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