KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_27408
Entry
HYPDE_27408       CDS       T02646                                 
Name
(GenBank) conjugal transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HYPDE_27408
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hdt02044]
    HYPDE_27408
Secretion system [BR:hdt02044]
 Type IV secretion system
  Trb secretion system protein
   HYPDE_27408
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: AGK57161
UniProt: N0B9F4
Position
complement(953126..954295)
AA seq 389 aa
MTDAPREDGGSNEDSRPPEEMRLRSSRPPVTRLSRKVLLGLGAAAAIGIGGALFFALKPQ
HQTGGSELYNTNNRNTPDGLANLPRDYTGLPKPVPQLGPPLPGDLGRPMANAGVAAPGMP
TGTDPEQQRIAQEQEAARVSHLFAPTNVKTTAAAPTPAAAQSPAGRNGGSADLTSQDHKL
AFLNGAVDRRTTSPDRVQAPASKYILQAGAVIPAALITGLRSDLPGQVTAQVTEDVYDSP
TGKILLIPQGARLVGQYDAQIAFGQTRALLVWNRLIMPNGRSIVLERQPGADTQGYAGLE
DEVDNHWGTLFKAAILSTLLSVGSEAGMSGNNNGSLAEAIQQGVSQSVNQTGQQVVSRSL
NVQPTITIRPGFPVRVMVTHDLVLEPYRA
NT seq 1170 nt   +upstreamnt  +downstreamnt
gtgacggatgctccccgcgaagacggtggatcgaatgaagacagtcgcccgcccgaggag
atgcggctgcgatcgagccgtccgcccgtcacacgcctatcgcgcaaagtgctactgggc
ttgggcgcggcggcagcgatcggtattggcggcgctctgtttttcgccctgaagccgcag
catcagaccggaggctccgaactctacaacaccaacaatcgcaacacgcccgacggcctc
gcgaaccttccccgagactataccgggctccccaagccggtgccccagctcgggccgccg
ctgccaggcgatctcggccggccgatggccaatgcgggggttgcggcgccgggaatgccg
acaggaaccgatcccgagcagcagcgcattgcgcaggagcaggaggcagcacgggtcagc
catctcttcgcgccgaccaatgtcaaaaccacagcagccgcgccgacaccagccgccgct
cagtcgcccgccgggcgaaacggcggatcggccgatctcacttcgcaggatcacaagctc
gcctttctcaatggcgcggtggaccgacgcaccacaagcccagaccgcgttcaggcgccg
gcgagcaaatacattctgcaggcgggtgcggtgatccccgccgcattgatcaccggcttg
cgctccgacttgcccggtcaggtgaccgcacaagtgacggaagacgtctatgacagtccg
acgggaaagatcctcctgatcccccagggcgcgcgcctcgtcggccagtacgatgcgcag
atcgcctttgggcaaacacgtgcgctcctcgtctggaatcgcctaatcatgccgaacggc
cgctcgatcgttctggagcgtcagccgggcgccgacacgcaaggctatgccggcctcgag
gacgaggtcgacaaccattggggcacgctgttcaaggccgcgattctctccacgctgctc
agcgtcggatcggaggccggcatgagcggcaacaacaacggctcgctcgccgaggccatt
cagcaaggcgtgtcgcaaagcgtcaatcagaccggccagcaggtggtcagccggtcgctc
aacgttcagccgaccatcactatccggccgggtttcccggtgcgcgtgatggtcacgcac
gacctcgttctcgaaccctaccgtgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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