KEGG T02646: HYPDE

Hyphomicrobium denitrificans 1NES1: HYPDE_28648

Entry

HYPDE_28648       CDS       T02646

Name

(GenBank) (uracil-5)-methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

hdt Hyphomicrobium denitrificans 1NES1

Brite

KEGG Orthology (KO) [BR:hdt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hdt03009]
    HYPDE_28648
Enzymes [BR:hdt01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     HYPDE_28648
Ribosome biogenesis [BR:hdt03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HYPDE_28648

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Met_10 MTS TRAM Cons_hypoth95 Methyltransf_31 Methyltransf_11 MethyltransfD12

Other DBs

NCBI-ProteinID:

AGK57409

UniProt:

N0B1Q1

Position

1195065..1196294

AA seq 409 aa
MSDERELLITRVGAQGDGFAESEGAPVFVPFALAGERVIADVDGERGRLLRVLQPSAERI
APICRHFGTCGGCAVQHMSSDAYRAWKRGLVASAFAARGLDVDVDELVEPGGKRRRAVFS
IERDDRGVVIGFHEAQSHVLVAIDECPVLEPKIVAALPALNALVAPLISKRGARLTVTLT
NSGLDVLLDGIERRLTPDIRSRLASGASTLQLARLAVGNDVVVETLPPFLSFATADVVLP
PGCFVQAVAEAEIEMARRILTAVGKVKTVADLFCGIGAFTLPLAARAKVLAFDGNQLAIE
ALRAAAKKATGLKPITARVRDLFREPLSPLELNEHDAVVFDPPRAGAEAQAQRLARSKVK
TVVAVSCNPATLARDARQLVDGGYKIEFVTPVDQFVYSAHVEVVAVFRR

NT seq 1230 nt +upstreamnt +downstreamnt
atgtcggatgaacgcgagcttctgatcacgcgtgtcggggcgcagggcgacggttttgcg
gagagcgaaggcgcgcctgttttcgtaccgttcgcgcttgctggcgaacgtgtgatcgca
gatgtcgatggcgagcgcgggcgattgctccgcgtcctgcagccgagtgcggaacgcatc
gctccgatctgccggcatttcgggacgtgcggaggctgcgccgttcagcacatgtcgtcg
gacgcctatcgggcgtggaaacgcggtcttgtcgcttcggcgtttgcggcgcgcgggctt
gatgtcgatgtcgacgaattggtcgagcccggtggaaagcgccggcgcgccgtgttctct
atcgagcgtgatgatcgaggcgtggtaatcgggtttcatgaggcccagtcgcatgtgctg
gtggcgatcgatgagtgccccgttctcgaaccgaagatcgttgcagcgcttccggcgctc
aacgcgcttgttgcgccgttgatttcaaagcgcggtgcgcgcctgacggtgacgttgacc
aattcgggcctcgatgtgctgctcgacggcatcgagcgtcgattgactcccgatatccgt
agccggctggcttctggagcaagcacgctgcaactggcgcggctcgccgttggcaacgat
gtcgtcgtcgagactttgccgccgtttctttcattcgccacggccgacgtcgtcctgccg
ccaggatgtttcgtgcaggccgttgcagaagcagaaattgagatggcgcggcgcattctg
acagccgtcggcaaggtcaagacggttgcggatttgttttgcggcattggcgctttcacg
cttccgctcgccgcacgcgcgaaagttctggcattcgacggcaatcagctggccatcgag
gcgcttagggcagctgcgaaaaaagccaccggcttgaagccgatcaccgcacgcgtgcgc
gatctctttcgcgagccgttgtcgccgttggaactcaatgagcatgacgcggtggttttc
gatccgccgcgcgccggggccgaagctcaagcgcagcggcttgcgaggtcgaaggtcaaa
accgtcgtcgccgtctcctgcaatccggcgacgctggctcgcgacgcacggcagctggtt
gacggcgggtataaaatcgaattcgtgaccccggtggatcagttcgtctactcagcgcac
gtcgaagtggttgccgtcttccggcgctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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