KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_39463
Entry
HYPDE_39463       CDS       T02646                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt00010  Glycolysis / Gluconeogenesis
hdt00020  Citrate cycle (TCA cycle)
hdt00260  Glycine, serine and threonine metabolism
hdt00280  Valine, leucine and isoleucine degradation
hdt00310  Lysine degradation
hdt00380  Tryptophan metabolism
hdt00620  Pyruvate metabolism
hdt00630  Glyoxylate and dicarboxylate metabolism
hdt00640  Propanoate metabolism
hdt00785  Lipoic acid metabolism
hdt01100  Metabolic pathways
hdt01110  Biosynthesis of secondary metabolites
hdt01120  Microbial metabolism in diverse environments
hdt01200  Carbon metabolism
hdt01210  2-Oxocarboxylic acid metabolism
hdt01240  Biosynthesis of cofactors
Module
hdt_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hdt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hdt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hdt_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HYPDE_39463
   00020 Citrate cycle (TCA cycle)
    HYPDE_39463
   00620 Pyruvate metabolism
    HYPDE_39463
   00630 Glyoxylate and dicarboxylate metabolism
    HYPDE_39463
   00640 Propanoate metabolism
    HYPDE_39463
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HYPDE_39463
   00280 Valine, leucine and isoleucine degradation
    HYPDE_39463
   00310 Lysine degradation
    HYPDE_39463
   00380 Tryptophan metabolism
    HYPDE_39463
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HYPDE_39463
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hdt04147]
    HYPDE_39463
Enzymes [BR:hdt01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HYPDE_39463
Exosome [BR:hdt04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HYPDE_39463
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_binding_2 NAD_binding_8 Pyr_redox_3 FAD_oxidored HI0933_like DAO FAD_binding_3 AlaDh_PNT_C Thi4 3HCDH_N Lys_Orn_oxgnase Lycopene_cycl
Other DBs
NCBI-ProteinID: AGK59561
UniProt: N0BGM0
Position
complement(3351415..3352827)
AA seq 470 aa
MTASYDLIVIGTGPGGYVCAIRAAQLGMKVAVVEKRGTHGGTCLNVGCIPSKALLHASHA
YDEAKHAFGAMGIDASPVLDLPKMQAFKREGVKGNVEGVAYLLKKNKIDSYFGTGRVLKS
GQVAVTLPGGETQTLEAKSIVIATGSDVARLPGIEIDEKRVVSSTGALELASVPRKLLVI
GAGVIGLELGSVWRRLGADVLVVEFFDRILPGIDKEIARSFQRLLEKQGIAFRLASKVTG
VSKPESPGKPLGIDIESAAGGVAEAIEADVVLVAVGRVPYTEGLGLAEAGVALDAKKRVL
VDGHFQTSASGIFAIGDVIAGPMLAHKAEDEGVAVAEIIAGQAGHVNYDVIPNVIYTSPE
VASVGKSEEELKAAGIAYNVGKFPFTANGRAKSIRMTDGFVKILADAATDRVLGVHIIGA
NAGEIIAEACVLMEFGGSAEDLARTCHAHPTLTEAVKEAALAVGKRAIHF
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgacagcatcctatgacctgatcgttatcggcacagggcccggcggctatgtctgtgcc
atccgcgccgcccagcttggcatgaaagtcgccgttgtcgaaaagcgcggcacgcatggc
ggcacatgtttgaacgtcggctgcatcccgtcgaaggctctgctgcacgcatcgcacgcc
tatgatgaggccaagcatgcgttcggcgcgatgggcatcgacgcgtcgccggttctcgat
ctgccgaagatgcaagctttcaagcgcgaaggcgtcaaaggcaacgtcgaaggcgtcgcc
tatcttctgaagaagaataaaatcgacagctacttcggaaccggccgcgtcttgaaaagc
ggtcaggttgccgtaaccttgccgggaggcgagacgcagacgctggaagcaaagtcgatc
gtgatcgcgacgggctcggatgttgcgcgtctgcccggcatcgagatcgacgagaagcgt
gtcgtatcatcgaccggcgctctggagcttgcatccgttcctcgcaagctgcttgtgatc
ggtgctggtgtcatcggccttgagctgggctccgtctggcgccgcctcggcgccgacgtg
ctggtcgtcgagttttttgaccgcatcctgccgggaattgacaaggagatcgcccgctcg
ttccagcgtcttctcgaaaagcagggcatcgcatttcggctcgcaagtaaggttacgggt
gtttccaagcccgaaagtccaggcaaaccgctcggcatcgatatcgaatcggcggcagga
ggcgtggccgaggccatcgaagccgatgtcgtgctcgttgcggtggggcgtgtgccttac
actgagggcctcggtcttgccgaggccggcgtggcgctcgatgcgaaaaagcgcgtcctg
gtcgacggccatttccagacgagcgcatcgggcatcttcgcaatcggcgatgtgatcgcg
ggcccgatgctggcgcacaaagccgaagatgaaggcgttgccgtcgccgaaattatcgct
ggccaagccggtcatgtgaattacgacgtcatcccgaacgtcatctacacatcgccggag
gttgcgagcgtcggcaaatctgaagaagagctgaaagctgccggcatcgcatacaacgtc
ggcaagtttccgttcacggccaacggtcgtgcgaagtcgatccgcatgacggacggcttc
gtcaaaatcctcgccgacgcggcgacggatcgtgtgctgggcgtccatatcatcggcgcc
aacgccggagagattattgcggaagcctgcgtgctgatggagttcggcggctcggcggaa
gacctcgcccggacctgtcacgcgcatccgacgttgaccgaagccgtcaaggaagcggcc
ctcgcagtcggcaaacgcgcgatccacttctga

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