KEGG T00135: HD0626

Haemophilus ducreyi: HD0626

Entry

HD0626 CDS T00135

Gene name

recD

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

hdu Haemophilus ducreyi

Pathway

hdu03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:hdu03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD AAA_11 Viral_helicase1 DUF2075 AAA_22 UvrD-helicase PIF1 UvrD_C NTPase_1 AAA_25 AAA_16 T2SE AAA_28 TrwB_AAD_bind NACHT Zeta_toxin AAA DEAD SRP54 AAA_18 AAA_5 ResIII AAA_17

Other DBs

NCBI-GI:

33151811

NCBI-GeneID:

1490593

UniProt:

Q7VNC7

Position

487021..488967

AA seq 648 aa
MHMLTLLHALKNRNLIAELDYQFAKMIDQKQQVYAYTPLEKNLAVLLAALISFNIMQGHT
ALRLDSSLANNPFGLNVKEEASLWQEILQKIEQIPPVKWPEILKDHIAFSHSPTQTAPLI
FQNGLLYFYRYWQAEYNVATYLKEAVETTVANQDLATDKKILDRLFPEPTTQIDWQKIAV
ATALRKKFSLISGGPGTGKTTTVSKLLAALQEKQLHSTKGSLKIALVAPTGKAAARLKES
ITQSLAHLKLTFDIPTPVSTIHRLLVMRPLQDKPFYHKQNPLHLDLLIVDEASMIDLFMI
EKLMNALKPTTRLIMLGDKDQLASVEAGAIMGELGHFMTQGYSTAHCTALNELTGYQLNM
MNQVPTICDSLCHLQKSYRFDANSGIGALAKKVNQQQADESWQTFLNPQFTDLEKIEYPN
KNQFTETHLWTQECVNLIVKKAVQCYQHYLTLVKQREKDPASVSVDAIFIAFQRIRFLSA
LRIGELGADRLNQRIAEALKKAKLINFINSRDRYLGKPILITQNSPENNIYSGDIGIILP
DENGMLRVYFDTKLESTHLSVSLSRIPESEPAYVMTVHKSQGSEFEQTFLIMPLNNAPVV
TKELIYTAITRAKKQFTVFCNKKNWYQGIQTNIQRQSGLKEQLINIFC

NT seq 1947 nt +upstreamnt +downstreamnt
atgcacatgttgacacttttacacgcgcttaaaaatagaaatttgattgctgaattagat
tatcaattcgctaaaatgatcgatcaaaaacaacaagtatatgcttatactccgctagaa
aaaaatttagcggtattattagcagccttaatttcttttaatataatgcaaggacatact
gcgttacggctagattcatcattagcaaataacccatttggtcttaatgttaaagaagaa
gcatctttatggcaggaaatattgcaaaaaattgagcaaataccaccggttaaatggcca
gaaatactaaaagatcatatcgcttttagccattcccctacgcaaacagcaccattaatc
tttcaaaatggtttattgtatttttatcgttattggcaagcagaatataatgtagcaacc
tatttaaaggaagcggtcgaaacgacagtagcaaatcaagatctcgccacagataaaaag
attcttgatcgactattccctgaaccaacaacgcaaatcgattggcaaaaaattgccgta
gcaactgcactacgcaaaaaattcagcttaatttctggtggccccggtactggcaaaacg
acgacggtctctaaattattagccgcgttacaagaaaagcagcttcattcaactaaaggc
tcgcttaaaattgcattggttgcgcccacaggcaaagcagccgctcgcttaaaagaatcc
attacacaaagtttggcacacctaaaattgacgtttgatatccctactcctgtttcaact
attcaccgcttattagtgatgcgcccactacaagataaacctttttatcataaacaaaac
ccactacatttagatttattaattgttgatgaagcttcaatgatagatttatttatgatt
gaaaaactgatgaatgcattaaaaccaacaacccgtttgattatgcttggtgataaagat
caactagcctctgttgaagcgggcgcaattatgggcgaattgggccattttatgactcaa
ggttatagtacagcacattgcactgctttgaatgaattaaccggataccaattaaatatg
atgaatcaagttccaacgatttgcgattcattatgtcatctacaaaaaagttatcgcttt
gatgctaattcaggcatcggcgcactggctaaaaaagtcaaccagcaacaagcggacgaa
tcttggcaaacttttctaaatccacaatttactgatttagaaaaaattgaatacccaaac
aaaaatcaattcactgaaacgcatttatggacacaagaatgtgttaatctaatcgttaaa
aaagcagtccaatgctatcaacattatttaaccttagttaaacaaagagaaaaagatccc
gctagtgtgagtgttgacgcaatttttatagcattccaacgtattcgttttttatccgca
ttaagaatcggtgaattaggcgccgaccgcttaaatcaacggattgccgaagcattgaaa
aaagcaaaattaatcaatttcataaatagccgtgatcgctacctaggtaaaccgattcta
attacccaaaactccccagaaaataatatctatagcggtgatattggcatcattttgcct
gacgaaaatggcatgttgagagtctattttgataccaaactagaaagtacacatttaagt
gtatccttaagccgtataccagagtccgaacccgcctacgtaatgacagtacataaatca
caaggctctgaatttgaacaaacctttctaattatgccactaaataatgcgcccgtagtt
accaaagaattaatttataccgcaatcacccgtgctaaaaaacaattcaccgtattctgt
aataaaaagaattggtaccaaggcattcaaactaatattcaacgccaaagcggtttaaaa
gaacaattaatcaacattttttgctag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (26)   
   Pfam (26)   
All databases (35)   

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