KEGG   Haemophilus ducreyi: HD_1588
Entry
HD_1588           CDS       T00135                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hdu  Haemophilus ducreyi
Pathway
hdu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HD_1588 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hdu03019]
    HD_1588 (pnp)
   03016 Transfer RNA biogenesis [BR:hdu03016]
    HD_1588 (pnp)
Enzymes [BR:hdu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     HD_1588 (pnp)
Messenger RNA biogenesis [BR:hdu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HD_1588 (pnp)
Transfer RNA biogenesis [BR:hdu03016]
 Prokaryotic type
  tRNA degradation factors
   HD_1588 (pnp)
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2 NTNH_C SLS1_KH2
Other DBs
NCBI-ProteinID: AAP96368
UniProt: Q7VL91
Position
1308506..1310644
AA seq 712 aa
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVSVVAKKEVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSENETLIARLIDRPIRPLFPEGFFNEIQIVATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTITEQKQSRLDLVVAG
TDKAVLMVESEADILSEEQMLAAVVFGHQQQQIVIENIKEFVKEAGKPRWDWQPAEANTA
LINQVKALAETRIGDAYRITEKQARYEQIDAIKADVIAQLTAQDETISEGAIIDIITALE
SSVVRGRILAGEPRIDGRTVDTVRALNICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGEKSDRFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVLAVMPSAEEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKATVAGIAMGLVKEDEKFVVLSDI
LGDEDHLGDMDFKVAGTRKGITALQMDIKIEGITPEIMHIALNQAKGARMHILNVMEQAL
PAPRADLSDFAPRIHTMKIDPKKIKDVIGKGGAVIRSLTEETGTSIDIDDDGTVKIAATD
NNAAKMVMSRIEEIVAEVEVNAIYTGKVSRVVDFGAFVTILGGKEGLVHISQITDARVER
VSDYLSVGQEVNVKVVEIDRQNRIRLTMKDLDNNLSTNVTPEAVVQEESTEN
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgacacccattgttaaacaatttaaatacggccaacataccgtaactctagaaacaggc
gctatcgcgcgtcaagccactgctgcggttatggcaagtatggacgatacgacagtcttt
gtaagtgtggtagcgaaaaaagaagtaaaagaaggtcaagacttcttcccattaacagta
aactatcaagaacgtacttatgcagctggccgtattcccggtggttttttcaaacgtgaa
ggacgcccgtccgaaaatgaaacgttaattgcacggctaatcgaccgcccaattcgtccg
cttttcccagaaggcttctttaatgaaattcaaattgttgctactgttgtttctgttaat
ccacaaattagcccggatttagtcgcaatgatcggcgcttctgcagcattatcactgtct
ggtgtaccatttaatggcccaattggtgcagcacgtgtcggctttattaatgatcaattt
gtccttaatccaacgattactgagcaaaaacaaagccgtttagatttagtggttgcaggt
acagataaagcggtcttaatggtcgaatctgaagcagatatcctttcagaagaacaaatg
ttagcggcggtggtatttggtcatcagcaacaacaaatagtgattgaaaatatcaaagaa
tttgtaaaagaagcgggaaaaccacgttgggattggcaaccagcagaagcaaatactgca
ttaattaatcaagtaaaagcattggcagaaacgcgtattggtgatgcctaccgcattaca
gaaaaacaagcacgttatgagcaaattgatgcgattaaagctgacgttatcgcacaatta
accgctcaagatgaaacaattagcgaaggtgctattattgatattatcaccgcattagaa
agttcggtcgtgcgtgggcgtatcttagcgggtgagcctcgtattgatggtcgtacagtg
gacacggttcgtgcattaaatatttgcaccggcgtattacctcgcacccatggttcggca
attttcacgcgtggtgaaactcaggcattagcagtcgctactttagggactgagcgtgat
gcacaaattattgatgaattaactggcgaaaaatccgaccgcttcttattccattataat
ttccctccatattctgtcggagagacaggtatgatcggctcaccaaaacgtcgcgaaatt
ggtcacggtcgtttagcaaaacgtggggtattagccgttatgccaagcgcagaagaattt
ccttatgtcgtacgtgttgtatcagaaattactgaatcaaatggttcttcctcaatggct
tccgtatgtggtgcgtctttagcgttaatggatgcaggtgtgccaattaaagctactgta
gcgggtattgctatgggattagttaaagaagacgaaaaatttgttgtgctttctgatatt
ttgggcgatgaagatcacttaggcgatatggactttaaagtagccggtacgcgcaaaggt
ataactgcactacaaatggatatcaaaattgaaggcattacgccagagattatgcatatt
gcattaaaccaagctaaaggtgcacgtatgcatattctgaacgtaatggaacaagcactc
cctgctccgcgtgcggatctttctgattttgcacctcgtattcacactatgaagattgat
cctaaaaaaatcaaagatgtgattggtaaaggcggtgccgttattcgttctttaactgaa
gaaaccggtacatccatcgatattgatgatgacggtacagtaaaaattgcagcaacagat
aataatgcggctaaaatggttatgtctcgtattgaagagatcgtagctgaagtagaagtg
aatgcaatttataccggtaaagtttcccgtgttgtcgattttggcgcattcgtgacgatt
ttaggtggcaaagaaggtttagtgcatatttcacaaattacagatgctcgtgttgaacgc
gtttctgattacctatcggtcggtcaagaagttaatgtaaaagtagtcgaaattgaccgc
caaaaccgtatccgcctaacgatgaaagatctggataataacctttcgacaaacgttact
ccggaagctgtcgttcaagaagaatctactgagaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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