KEGG   Haemophilus ducreyi: HD_1765
Entry
HD_1765           CDS       T00135                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
hdu  Haemophilus ducreyi
Brite
KEGG Orthology (KO) [BR:hdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hdu03009]
    HD_1765 (rumA)
Enzymes [BR:hdu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     HD_1765 (rumA)
Ribosome biogenesis [BR:hdu03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HD_1765 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 TRAM PCMT Cons_hypoth95 Methyltransf_11 MTS Met_10 RrnaAD Methyltransf_23 Methyltransf_15 Ubie_methyltran DOT1 Methyltransf_4
Other DBs
NCBI-ProteinID: AAP96519
UniProt: Q7VKU9
Position
1476563..1477891
AA seq 442 aa
MAIFYSEKTAKQTAKNCCKTTARQIVNIHSLDYQGLDVAKINGKTWFIENALPNEQVLIH
VIEEKRQYGRAKANKILQASPLRQQPSCISYPQCGGCQMQHIKLDVQRQTKQQAFFKQLQ
RLQTEPIDWQPMISGQDKHYRRRTKLSMAIQRNQLVIGFRQQNTHQIIPLTDCEVLEQPL
STLLPKLQHLFAGWKMKKALGHIELVNADNTRAMLVLHIGKINAQDQHMLLNFAKAEQLS
LYLMCDENHIEHLCGEAPYYQINGLTLHFCIRDFIQVNQPLNQKMVNKALEWLAITAEDR
ILDLFCGIGNFSLPIAQQAGFVVGVEGVEEMVKQAKINQQTSGLNNIAFYQTNLAESFVD
QHWATQPFNKVLLDPARQGALFCLDHLMALTPERIIYISCNPATLMRDAEKLIRHGYKIA
KSAVIDMFPHTGHLESISMFIK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggcgattttttactctgagaaaacagcaaaacagactgccaaaaactgttgcaaaacg
accgctagacaaattgttaatatccactcactggattaccaaggattagatgtagctaaa
attaatggcaaaacgtggtttatcgaaaacgctttgcctaatgaacaagtgttaattcac
gtgattgaagaaaaacgccaatatggtagagcaaaagccaacaaaatattacaggcttcg
ccacttcgtcagcaaccgagttgtatcagctacccacaatgtgggggctgccaaatgcaa
catattaagcttgatgtacaacgccaaaccaaacaacaggcattctttaagcaattacaa
cgtttgcaaacagagccgattgattggcaacctatgattagtggtcaagataaacattat
cgtcgccgaacaaaattaagtatggcaatacaacgtaatcaattagtgattgggtttcgt
cagcaaaatactcatcaaattattccgcttactgactgtgaagtactagaacaaccgctt
tctacattactgcccaaactacaacacttatttgctggctggaaaatgaaaaaagcatta
ggccatattgaactagttaacgctgataatacgcgagcgatgttggttctccatatagga
aaaataaatgctcaagatcagcacatgttgctcaattttgcaaaagcagaacagctttcg
ctttatttaatgtgtgatgagaatcacattgaacatctttgcggtgaagcaccttattac
caaattaacgggctaacattacatttttgcattcgtgattttattcaagttaatcagccg
ttaaatcaaaaaatggttaataaagcgttagaatggctagcaattacagcagaagatcgc
attcttgatttattctgtggcataggcaatttcagtctaccgattgcacaacaagcgggt
ttcgtagttggagtagaaggtgtagaggaaatggtcaagcaagccaaaataaatcagcaa
actagcgggttaaacaatatagcattttaccaaactaatttagcagaatcttttgttgat
caacattgggctacacaaccttttaataaagtattactcgatcccgctcgtcaaggtgcc
ttgttttgtttagatcatttaatggcattaacaccagagcgaattatttatatttcgtgt
aatccagcgactttaatgcgtgacgctgaaaaactcattaggcatggctataaaatagca
aaatcagcagtgattgatatgtttccacatacggggcatttagaatccatttcaatgttt
ataaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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