KEGG   Helicobacter pylori BM012A: U063_0261
Entry
U063_0261         CDS       T02939                                 
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
heb  Helicobacter pylori BM012A
Pathway
heb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:heb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    U063_0261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:heb03400]
    U063_0261
Enzymes [BR:heb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     U063_0261
DNA repair and recombination proteins [BR:heb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     U063_0261
 Prokaryotic type
     U063_0261
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AHA87626
Position
258235..258936
AA seq 233 aa
MKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKGPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLKKEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPMPC
CGDLSAWAKRGVLLLNAILSVEKNQAASHKYIGWEAFSDRILERLFETISPLIVVLLGKV
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQNAYREVYRKDFDFSL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaagctttttgactacgctcctttaagcttggcttggcgggaatttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaagccctaaaaggccct
aaaaccattttccctaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcatccttttagggcaagatccctaccattccacctacctaaaaaaggag
caagaattgccggtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttgggcgtgcctatgccttgt
tgtggggatttgagtgcgtgggctaaaaggggtgtgctgttattgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaatatattggctgggaagcttttagcgacagg
atattagaacgcctttttgaaacgatttcccctttaatcgtggtgttattagggaaagtc
gcccaaaaaaagatcgcgctaatccccaaaaacaaacacatcatcatcacagcccctcac
cctagccccttatctagaggttttttagggagtggggtttttacaagcgttcaaaacgct
tatagagaggtttatcgcaaggattttgattttagtttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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