KEGG   Candidatus Hoaglandella endobia: TPER_HE00084
Entry
TPER_HE00084      CDS       T04484                                 
Symbol
deaD_2
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
hed  Candidatus Hoaglandella endobia
Pathway
hed03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hed00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPER_HE00084 (deaD_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hed03019]
    TPER_HE00084 (deaD_2)
   03009 Ribosome biogenesis [BR:hed03009]
    TPER_HE00084 (deaD_2)
Enzymes [BR:hed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TPER_HE00084 (deaD_2)
Messenger RNA biogenesis [BR:hed03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TPER_HE00084 (deaD_2)
Ribosome biogenesis [BR:hed03009]
 Prokaryotic type
  rRNA helicases
   TPER_HE00084 (deaD_2)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: CUX97035
UniProt: A0A143WTJ8
Position
I:complement(81230..83026)
AA seq 598 aa
MSKLETSFANLGLKNPLLNALIDLGYEKPSPIQVACIPPLLAGHDVMGMAQTGSGKTAAF
SLPLLNNIKPELLVPQVLVLVPTRELAVQVSEAFDYFAKYMKGINIISLYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVENILAQVPAK
HQTALFSATMPEAIRRITHRFMNEPQEVRIQSNVTTRPDISQSYWAVYGMRKNEALIRFL
ETEDFDAAIIFVRTKNTTLEVAEVLERSGYNSAALNGDMNQALREQTLDRLKDGRLDILI
ATDVAARGLDVERISLVINYDIPLDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ESIMKLTIPEVKLPTNKVLGARRLAKFVARVQNQLESSDLEVYRALLTKLQLVVDELLDM
ETLAAALLKLASAERPLILLPDPVIERRPRRGEFHERDDFQNGGERAQRRDVREMDLYRI
EVGRNDGVEVRHIVGAIANEGDISSRCIGNVKLFASHSTIELPKGMPSELLSHFTRTRIL
NKPINMQFVGKAQSRGGERRNGGRRSFDSYRDCSTSGRGERRYDNNVNNPRLLAGTRK
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtctaaattagaaacctcttttgccaatcttgggctgaaaaatccgcttctgaacgca
ctgatcgatctcggttatgaaaaaccgtctcccatacaagtcgcctgtattccgccgctg
ctagctgggcatgacgtaatgggtatggcacagaccggcagcggcaaaacagcggccttc
tccctgccgctgttgaacaatattaagcctgagctattggttccacaggtactagtgcta
gtgcctacccgagaactggcagtacaggttagcgaagcatttgactatttcgctaagtat
atgaaaggcatcaatataatttcactgtacggcggtcaacgttacgacgtgcaactgcgt
gccttgcgtcaaggaccgcaggtggtggtcggcactcctggccgtctgctagaccactta
aaacgcggcacgctgaatctgtctaacttgagcgggctggtactggacgaagcggatgag
atgctacgcatgggttttatcgaagatgtggaaaacattttggcgcaggtgccagccaag
catcagactgcattattctctgccacaatgccggaagcgattcgccgcattactcacaga
tttatgaatgagccgcaagaagtacgcatacagtctaacgtgaccactcgtcccgatatt
agccagagttactgggcggtatacggcatgcgtaagaatgaagcgctgattcgtttccta
gaaactgaagactttgacgccgccattatcttcgtacgcaccaagaatacgacgctggaa
gttgctgaagtgcttgagcgcagtggctacaatagcgccgcgcttaacggcgatatgaat
caggcgctgcgcgagcagactcttgatcgcctgaaggatggccgcctggatatactaata
gccaccgatgtagccgctagaggtctagacgttgagcgaattagtctagtgattaactac
gatatcccgctggatgccgaatcctatgtgcaccgtatcggccgtactggccgcgccggt
cgtgccggacgggcactactgttcgtagaaaaccgcgaacgccgtttgctgcgcaatatc
gaaagcatcatgaaacttaccattcccgaagttaaactgccgacaaacaaagtgctgggc
gcccgtcgtctggctaaatttgttgctagagtccaaaatcaactggagagcagtgacctg
gaggtgtaccgtgcgctactaactaaactgcagctagtggtggatgagctactagatatg
gaaacgctagcagcggcgttgttaaagctggcctcagccgagcgtccgctcatcctgttg
ccggatcccgttatcgaacgccggccgcggcgtggcgagttccacgagcgtgatgacttt
cagaacggcggtgagcgtgcccaacgtcgtgatgtgagagagatggatctctaccgtatt
gaagtcggccgtaatgacggcgtggaagtgcgtcatatcgttggtgcgatcgctaacgaa
ggggatatcagcagtcgttgtatcggtaatgttaagttatttgcgtcccattctaccatc
gagctgcccaaagggatgcccagtgaactgttgtctcacttcacacgcacacgtattctg
aacaagccgatcaatatgcaatttgtcggtaaagcacagtcacgcggtggagaacgccgt
aacggtggccgccgtagctttgacagttatcgtgactgctctacctctggtagaggagaa
cgccgctacgataataatgtcaataacccccgactgttggcggggacgcgtaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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