KEGG   Herbaspirillum sp. meg3: hmeg3_05575
Entry
hmeg3_05575       CDS       T05024                                 
Name
(GenBank) 23S rRNA pseudouridylate synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
hee  Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:hee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hee03009]
    hmeg3_05575
Enzymes [BR:hee01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     hmeg3_05575
Ribosome biogenesis [BR:hee03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    hmeg3_05575
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ASU37819
UniProt: A0A223P6S1
Position
1219591..1221576
AA seq 661 aa
MKPSSSNDEKQVDLFGAAADNADTAAAKPAARKRIKKVVADAPVAEEVAPVKKAAVKKTV
TKKAAAEKAATDVAAPVAAAVVAEVAPAGEVAAPKKRATRAKKPVADAAVESAPVAASAS
APVVPAAAPEVPKVIVTIGEEVTAAPVLLDAPADNARTKPARRGVRGPRALRNNRAAQRA
AESSEAAPVNPVVAEAAVSHGAGDANAPVPVADQAMAESRREGQGQDRNRQQKGKKPFAK
GGKPKAPQLGLRSHDAGDDIFSFVTSDAYDREDGAKGGARNGHQLRGKNGRRDLTSEDDA
PKLHKVLADSGLGSRRDMEELIVAGRVSVNGEPAHIGQRILPTDQVRINGKLLQRKVSKK
PPRVLVYHKPAGEIVSHNDPEGRPSVFDRLPNMKAAKWLAVGRLDFNTEGLLLFTTSGDL
ANRLMHPRYNIEREYAVRTLGELEQGMRQKLLHGVELDDGVAQFSKIADGGGEGVNKWYR
VTIGEGRNREVRRMFEAIGLTVSRLIRTRYGMMMLPQGLKRGRWEELEENAVRGMLAACG
LEKVGGDAPAGNGKGRGNSANGNNGNSNGQPRSNANANPMQQKGPRREPWQGQGQGPRQG
QGQGQGQGGRPQQNKPRQPDPLQTALGFPDAGQRRQNRPQRSGGMAGQGMGAGGMPRRRR
G
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgaaaccatctagttccaacgatgagaagcaggtagacctctttggtgctgccgcggac
aatgccgatactgccgccgccaaaccggctgcgcgcaagcggatcaaaaaggtagtcgcc
gacgcgcctgtcgccgaagaagttgcgccggtcaagaaggccgccgtcaaaaagacggta
actaaaaaagctgctgctgagaaagctgcgacggatgttgcggcgccagttgccgctgct
gtggttgccgaggtcgcgcccgctggtgaggtcgctgcgccgaagaagcgcgcgacccgc
gccaagaagccggtggctgatgctgctgtggaatctgcacccgtcgccgcctccgcctcc
gctcctgtcgtgcccgccgctgcaccggaagtgccgaaagtcattgtaactatcggcgaa
gaagtgactgccgctccagttttgctggatgcgcctgctgacaatgcgcgcaccaagccg
gctcgacgtggcgtgcgcgggccgcgtgccttgcgtaacaaccgcgctgctcagcgcgct
gcggaaagcagcgaagccgctcccgtcaatccggtggttgccgaggctgctgtttctcac
ggtgcgggcgatgccaatgcgccggttcctgttgctgatcaagccatggctgagtcgcgc
cgtgagggccaaggtcaggatcgcaatcgtcagcaaaagggcaagaagccattcgccaaa
ggcggcaagccgaaggcgccgcaactgggtttgcgctcgcatgatgcaggcgacgatatt
ttctcgtttgttacttcggatgcgtacgacagggaagatggcgccaaaggcggtgctcgc
aacggtcatcagctgcgcggcaagaacggtcgccgcgatctgacctccgaggatgacgca
cccaagctgcacaaagtactggcggattccggtctcggttcacgccgcgatatggaagag
ctgatcgttgccggccgcgtgtcggtcaacggtgagcctgcgcatatcggtcagcgtatt
ctgccgaccgatcaggtgcgtatcaacggcaagttgctgcaacgcaaagtcagcaaaaaa
ccaccgcgcgttctggtctatcacaagcctgcgggtgaaatcgtcagtcataacgaccct
gaaggccgtccatcggtttttgatcgcctgccgaacatgaaggctgcgaaatggctggct
gtcggccgtctcgacttcaacaccgagggactgttgctgtttacaacctccggcgacctc
gcgaaccgcctgatgcatccgcgctacaacattgagcgtgaatacgccgtgcgtacgctg
ggtgagctcgaacagggcatgcgtcagaagctgttgcacggcgtagagctggacgacggc
gtggcgcaattctccaagatcgccgacggcggcggtgaaggcgtcaacaagtggtaccgc
gtgaccatcggcgaaggccgtaatcgcgaagtgcgccgcatgtttgaggctatcggtctg
accgtttcgcgtctgatccgtacccgctacggcatgatgatgttgccgcaaggtctcaag
cgcggtcgctgggaagaattggaagaaaatgccgtacgcggcatgctggctgcctgcggc
ctggaaaaagtcggcggcgatgccccggccggcaacggtaagggacgtggcaacagtgcg
aatggtaataatggcaacagcaatggccagccgcgcagcaacgccaatgccaatccgatg
cagcagaaaggtccgcgccgcgaaccgtggcagggtcaaggtcaggggcctcgtcagggg
caaggccaaggtcagggccaaggcggtcgtccgcagcaaaacaagccgcgtcagcccgat
cctttgcagaccgcgctgggctttccggatgcgggtcagcgtcgtcaaaaccgtccgcaa
cgcagtggtggcatggccggtcagggcatgggcgcaggcggtatgccgcgtcggcgacgc
gggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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