KEGG T01910: HPF16

Helicobacter pylori F16: HPF16_0625

Entry

HPF16_0625 CDS T01910

Gene name

ddl

Definition

D-alanyl-alanine synthetase A

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

hef Helicobacter pylori F16

Pathway

hef00473	D-Alanine metabolism
hef00550	Peptidoglycan biosynthesis
hef01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:hef00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:hef00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATPgrasp_TupA CPSase_L_D2 GARS_A RimK Ycf54

Other DBs

NCBI-GI:

385217384

NCBI-GeneID:

12358895

UniProt:

E6NDL2

Position

complement(626372..627415)

AA seq 347 aa
MEFCVLFGGASFEYEISIVSAIALKEALKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLPPLILTHNGLLKSSFLGAKTIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNCANALNLIGFNFPFIIKPSNAGSSLG
VSVVKEEKELIYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEF
LDFKQKYLDFSRNKAPKANLSSALEEQLKENFKKLYNDLFDGALIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK

NT seq 1044 nt +upstreamnt +downstreamnt
gtggaattttgcgttttatttggtggggcgagttttgagtatgaaatcagcattgtgagt
gcgatcgcgcttaaagaagcgctaaaggataggattaaatactttatttttttagatgaa
aaccatcatttttacttgattgaagaatccaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattaccccccctaatccttacgcataatggcttgcttaagagctcgttt
ttaggtgctaagactatagaattgcctttagtgatcaatcttgtgcatgggggcgatggc
gaagatgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgccaaagactta
ggggtaaaggctttagattatgttcttttgaatgaaaaaaactgcgctaacgctctaaat
ttgattggctttaattttcctttcatcatcaagcccagtaacgccggtagctctttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacggcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcagggagtgaaagaatacaatttagccggt
tgcaagatcaaaaaggatttttgtttttcctatgttgaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaacaaagcccctaaagcgaatctt
tctagcgccctagaagaacaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgcttattcgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggctaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaaaatcccaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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