KEGG   Helicobacter pylori F16: HPF16_1278
Entry
HPF16_1278        CDS       T01910                                 
Symbol
gmd
Name
(GenBank) GDP-D-mannose dehydratase
  KO
K01711  GDPmannose 4,6-dehydratase [EC:4.2.1.47]
Organism
hef  Helicobacter pylori F16
Pathway
hef00051  Fructose and mannose metabolism
hef00520  Amino sugar and nucleotide sugar metabolism
hef00541  O-Antigen nucleotide sugar biosynthesis
hef01100  Metabolic pathways
hef01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:hef00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00051 Fructose and mannose metabolism
    HPF16_1278 (gmd)
   00520 Amino sugar and nucleotide sugar metabolism
    HPF16_1278 (gmd)
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    HPF16_1278 (gmd)
Enzymes [BR:hef01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.47  GDP-mannose 4,6-dehydratase
     HPF16_1278 (gmd)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 TPR_3 adh_short
Other DBs
NCBI-ProteinID: BAJ55875
Position
complement(1339544..1340689)
AA seq 381 aa
MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRF
FLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMR
ILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLF
AVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMH
LMLQAPIPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANAL
KLNLSHLKTGQIVVRIDECYFRPTEVDLLLGDPTKAEKELGWVREYDLKELVKDMLEHDL
KECQKNLYLQDGGYILRNFYE
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgaaagaaaaaatcgctttaatcaccggggttaccgggcaagatgggagctatctggct
gaatacttgctgaatttgggttatgaagtgcatgggttaaaaaggcgctcttctagcatc
aacacttctaggatcgatcatctgtatgaagatttgcacagcgagcacaaaaggcgtttc
ttcttgcactatggggatatgaccgatagctctaatcttatccatttaatcgctaccact
aagcctacagagatttataatttagccgctcaaagccatgtgaaagtctcttttgaaacc
ccagaatacaccgctaacgctgatggtattggcacgctaaggattttagaagccatgcgg
attttaggattagaaaagaaaacacgattttatcaagccagcacgagcgaattgtatggt
gaagttttagagaccccacaaaatgaaaacaccccctttaacccacgaagcccctatgcg
gtcgctaaaatgtatgccttttacatcaccaaaaattacagagaggcctataacttgttt
gcggttaatggcattctttttaaccatgagagcagggtaaggggcgaaacttttgttact
cgtaaaatcacgcgagccgctagcgcgatagcgtataacttaacagattgcttgtattta
gggaatttagacgctaaaagagactgggggcatgccaaagattatgtgaaaatgatgcat
ttaatgctccaagcgcccattccgcaagattatgtgatcgctacaggtaagaccacaagc
gtgcgcgattttgtgaaaatgagctttgaatttatcggtattgatttagaatttcaaaat
acagggattaaagaaatcggtttgattaaaagcgttgatgaaaaaagagcgaacgcttta
aaattaaacttaagccatttaaaaacaggccaaatcgtggtgcgcatagacgagtgctat
ttcaggcctactgaagtggatttgcttttaggcgatcccactaaggcagaaaaagagcta
ggctgggttagggaatacgatttaaaagagttggttaaggacatgttagagcatgattta
aaagaatgccagaaaaacctttacttgcaagatgggggctatattttaaggaatttttat
gaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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