KEGG   Helicobacter pylori Rif2: C730_07880
Entry
C730_07880        CDS       T02318                                 
Name
(GenBank) type III restriction enzyme R protein (res)
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hei  Helicobacter pylori Rif2
Brite
KEGG Orthology (KO) [BR:hei00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hei02048]
    C730_07880
Enzymes [BR:hei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     C730_07880
Prokaryotic defense system [BR:hei02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   C730_07880
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD Speriolin_C
Other DBs
NCBI-ProteinID: AFV45929
Position
complement(1597218..1600121)
AA seq 967 aa
MKIKFKRLDYQEQCRDQILGVFKGIDLKEPENDAQRISNPVFEIGAIKDLLLENIENLRS
KQKITQGSVGIDKSLNCDILMETGTGKTFCFLECVYALHKNHHLSKFIVLTPSNAIKLGV
LKSVEITREFFKSEYSNTHLESYEDIERFILASNHKCCVLVMTFSAFNKEKNTINKSCLE
NTNLFNGATSYMQALVSMRPIVIMDEPHRFLGDKTKKYLEQLNALLTLRFGATFKDDYNN
LIYTLDSKKAFDCALVKSISVASVGESNECFLELKGIEKKEAAINYTDLENKTQSVKVKE
HDNLGVVTQISALEDYIVEKITKTEIRFLNGFNLLLDQKEPFSHLLEGEQEVMLKEAIKS
HFEREEGLFKKGIKALCMVFISGVNSYLSENEKPAKLALLFEKLYQQKLEEVLKKPLDEN
YRAYLECTREDIKKVHGGYFAKSKKEGDETKTIELILKEKEKLLSFDSDLRFIFSQWALQ
EGWDNPNVMTICKLAPSHSNITKLQQIGRGLRLAVNDKGERITKEHADFDFVNELVVIVP
QVEGDFVGAIQQEISEHSLIKQEFSAEELEKSGVVKKGRYGFLLETLEGLGFGEKTGDEN
FKLTLNQNEFLEKEPELEKLKDEKYLDFEKLKDFLKDRLIGNSRVRDKNERKSEKIKINK
ENFKKFETLWESLNHQARIAYAIDSESLIDEIVKNINSSFNVSSKIVSVTTHKKVETMGN
NAKTEIFERENACVWSLHEFISALSNKVKLSFKSVAKVLENIDENKFNEIKKNEQEGLRR
LEELFLEIIYQNIKDKISYQMRETTIKNRKNDAFYDEKGEIREFLDGSLGADKYEIKNSS
VREKCLYENFMQVDSEIEKDTIEESNDTKIIVFGKLPRVKIPIGLNQTYSPDFGYVVENN
DKKVLLVVETKGVDKKSELRPEEERKISTAKKFFEALKKQGVNIEYKTKMEKDQLSALIN
EVLNRKD
NT seq 2904 nt   +upstreamnt  +downstreamnt
gtgaaaatcaaattcaaacgattggactatcaggagcaatgccgggaccaaattttaggg
gtgtttaaggggattgatttgaaagagccagaaaatgacgctcaaaggatttctaaccct
gtttttgaaataggagcgatcaaagatcttttattagaaaatattgagaatttgcgatcg
aaacaaaaaataacccaggggagcgtggggattgacaagtcgttaaactgcgatatttta
atggaaacaggcaccgggaagaccttttgctttttggaatgtgtttatgccttgcacaaa
aaccaccatttgtcaaaattcatcgttttaacgccaagcaacgccattaaattaggggtt
ttaaagagcgttgaaatcaccagagaattttttaaaagcgagtattctaacacgcattta
gaaagctatgaagatatagaaagatttattctagcgagcaaccataaatgttgtgtgttg
gtgatgactttttctgccttcaataaagagaaaaacactattaataaatcatgcctagaa
aacacgaatctattcaatggtgcaacaagttacatgcaagctttagtgagtatgcgcccc
atcgtcatcatggacgaaccgcaccgatttttaggcgataaaacaaaaaaatatttggaa
caattaaacgctttactcacgctcaggtttggggcgacttttaaagatgattataataat
ctgatttatacgctagatagcaaaaaagcgtttgattgtgccctagtgaaaagcattagc
gtggcgtctgtgggggagagtaacgagtgttttttagagcttaaagggattgaaaaaaaa
gaagctgcaattaactacacggatttagaaaataaaactcaaagcgtcaaagtcaaagag
catgataatttaggggtggtaactcaaatcagcgctttagaagattacattgtagaaaaa
atcactaaaactgagattcgttttctcaatggctttaatttgttactggatcaaaaagag
cctttttctcatcttttagagggcgagcaagaagtgatgctgaaagaagcgataaaaagc
cattttgaaagagaagaagggctttttaaaaaggggattaaagccttgtgcatggtgttt
attagcggggtgaatagctatttaagcgagaatgaaaagccggctaaattggccctttta
tttgaaaaactctaccagcaaaagcttgaagaagtcttaaaaaagcctttagatgaaaat
tatagagcgtatttagagtgcactagagaagatattaaaaaagtgcatggagggtatttc
gctaaaagcaaaaaagagggcgatgaaactaaaacgatcgaactcattttaaaagaaaag
gaaaaattgctgagttttgattccgatctcaggtttattttttcgcaatgggcgttgcaa
gaggggtgggataaccctaacgtgatgacgatttgcaaattagcccccagccattccaat
atcactaaattgcaacaaatcggtagggggttaaggctcgctgtgaatgataagggcgaa
cgcatcactaaagagcatgctgattttgattttgtcaatgaattggtggtgatcgtgccg
caagtggagggggattttgtgggagcgatccagcaagagataagcgaacacagcttgatt
aaacaagaatttagcgcagaagagttagaaaaaagcggcgttgttaaaaaagggcgttac
gggtttttattggaaacattagagggtttgggttttggagaaaaaacaggtgatgaaaac
tttaaactcactctcaatcaaaacgaatttttagaaaaagagccagaacttgaaaaatta
aaagatgaaaaatacctggattttgaaaaattaaaagattttttaaaagatcgcttgatt
ggtaattccagagtgagggacaaaaacgagcgaaagagtgaaaaaatcaaaatcaataaa
gaaaattttaaaaaatttgaaaccttatgggaaagtttgaatcatcaagcccggatcgct
tatgccattgatagcgagagcttgattgatgagattgtcaaaaatattaattcttctttt
aatgtcagttcaaaaatcgtttcggttacgacgcataaaaaagtagaaactatgggaaat
aacgccaaaacagagatttttgagcgagaaaacgcatgcgtgtggagtttgcatgaattt
atcagcgccttgtccaataaggtgaaattgagttttaaaagcgtggctaaagtgttggaa
aacattgatgaaaacaagtttaatgaaattaaaaaaaacgaacaagagggattaaggcgc
ttagaagagctgtttttggaaatcatttatcaaaatattaaagataaaatttcctatcaa
atgcgcgaaacgaccattaaaaacagaaaaaacgatgcgttttatgatgaaaagggagag
attagagagtttttagacgggagtttgggggcggataaatatgagattaaaaattcaagc
gtgcgagaaaaatgcctgtatgaaaatttcatgcaagtggatagcgagattgaaaaagac
acgattgaagaatctaacgacactaaaatcattgtttttggtaagctccctagggttaaa
atcccgatagggttaaatcaaacttatagccctgattttgggtatgtggttgaaaacaac
gataaaaaagtgttattagtggtagaaactaagggggttgataaaaaaagcgaattacgc
cctgaagaagagcggaaaatttcaaccgctaagaaattttttgaagctttaaaaaagcaa
ggcgtgaatattgaatacaaaaccaaaatggaaaaagatcaattaagcgcgttgattaat
gaagttttaaatcgtaaagattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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