KEGG   Halomonas elongata: HELO_3843
Entry
HELO_3843         CDS       T01311                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
hel  Halomonas elongata
Pathway
hel00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hel00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HELO_3843 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hel01007]
    HELO_3843 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hel03016]
    HELO_3843 (lysS)
Enzymes [BR:hel01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     HELO_3843 (lysS)
Amino acid related enzymes [BR:hel01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   HELO_3843 (lysS)
Transfer RNA biogenesis [BR:hel03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HELO_3843 (lysS)
 Prokaryotic type
   Other AARSs
    HELO_3843 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CBV43727
UniProt: E1V955
Position
complement(3333435..3334988)
AA seq 517 aa
MAHQDNSQAPAGTQDENHLIAERRAKLAARREQAAASGGSAFPNDFRRDSLAAELAAELG
DKDKAELESLGRPAAVAGRILRKRGPFIVIQDASGQIQLYVDKKGLPAETLEDIKGWDIG
DIVAGRGPVHKSGKGDLYVMMEEARLLTKSLRPLPDKFHGLTDMEARYRQRYVDLIMNPD
SRRVFETRAGVISAMRRFFEDHGFMEVETPMLQPIPGGATARPFITHHNALDIDMYLRIA
PELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEYYQAYADYQDLMDFTEAMLR
TVTREVLGDTTVVSTVRDSEGEVLETFEYDFGKPFERLSVFDAILAYNPDITAEALADEA
AARQIAERLDIDVKDGWGLGKVQIEIFEKTVEHRLQQPTFIIDYPTEVSPLARRKDTDPF
VTERFEFFVGGRELANGFSELNDAEDQAERFAAQAAEKDAGDQEAMYYDADYVRALEYGL
PPTAGEGIGIDRLVMLLTDSASIRDVLLFPAMRPSAD
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcccaccaggacaattcgcaagcccctgcggggacccaggacgagaatcacctgatc
gcggaacgacgggccaagctggccgcgcgccgtgagcaggccgccgccagcggtggcagc
gccttccccaatgacttccgccgcgacagcctcgccgccgaactggccgccgaactgggc
gacaaggacaaggccgagctcgagtcgctagggcggccggccgccgtggcggggcggatc
ctgcgcaagcgcgggcccttcatcgtcatccaggacgcctccggccagatccagctctac
gtcgacaagaaggggctgcccgccgagaccctcgaggacatcaagggctgggacatcggc
gacatcgtggccggccgcggcccggtgcacaagtcgggcaagggcgatctctatgtgatg
atggaagaggcgcgcctgctgaccaagagcctgcggccgctgcccgacaagttccatggc
ctgaccgacatggaagcccgctatcgtcagcgctacgtcgacctgatcatgaaccccgac
tcgcgtcgggtcttcgagacgcgcgccggcgtgatcagcgccatgcgtcgcttcttcgag
gatcacggcttcatggaagtcgagacgccgatgctgcagccgattcccggcggcgcgacg
gcccggcccttcatcacccatcacaatgcgctggacatcgacatgtacctgcgcatcgcc
ccggagctctacctcaagcgcctggtggtgggaggcttcgagaaggtcttcgagatcaac
cgcaatttccgcaacgaggggctgtccacgcgtcacaaccctgagttcaccatggtcgag
tactaccaggcctacgcggattatcaggatctcatggacttcaccgaggccatgctgcgt
accgtgacccgtgaagtgctgggcgataccaccgtggtcagcaccgtgcgtgacagcgag
ggcgaagtgctcgaaaccttcgagtacgacttcggcaagccgttcgagcgcctcagcgtg
ttcgacgccatcctggcctacaacccggatatcaccgccgaggcactggccgacgaggcc
gcggcgcggcagatcgccgagcgcctggatatcgacgtcaaggatggctgggggctcggc
aaggtccagatcgagatcttcgagaagaccgtcgagcatcgtctccagcagccgaccttc
atcatcgactatcccaccgaggtcagcccgctggcgcgccgcaaggataccgatcccttc
gtcaccgagcgcttcgagttcttcgtcggcggtcgcgaactggccaatggtttctccgag
ctcaatgatgccgaggaccaggccgagcgcttcgccgcccaggccgcggagaaggacgcc
ggcgaccaggaggccatgtactacgatgccgactacgtgcgcgccctggagtacggcctt
ccgcccacggcgggcgagggcatcggcatcgaccgcctggtgatgctgctcaccgacagc
gcctcgatccgtgatgtgctgttgttcccggccatgcggccttccgcggactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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