KEGG   Halomonas elongata: HELO_4133
Entry
HELO_4133         CDS       T01311                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
hel  Halomonas elongata
Pathway
hel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HELO_4133 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hel03019]
    HELO_4133 (pnp)
   03016 Transfer RNA biogenesis [BR:hel03016]
    HELO_4133 (pnp)
Enzymes [BR:hel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     HELO_4133 (pnp)
Messenger RNA biogenesis [BR:hel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HELO_4133 (pnp)
Transfer RNA biogenesis [BR:hel03016]
 Prokaryotic type
  tRNA degradation factors
   HELO_4133 (pnp)
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2
Other DBs
NCBI-ProteinID: CBV44017
UniProt: E1VAR8
Position
complement(3682001..3684133)
AA seq 710 aa
MNPVKKTFEYGRSTVTLETGRIARQASGAVMVTMDDTVVLCTVVAKKDVNPSQPFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVICTVLSTD
RNHDPDIAAMIGTSAALAISGVPFNGPIGAARVGFTEEHGYFLNPSVEELASSELNMVVA
GTEKAVLMVESEANELLEDEMLGAVLYGHQEMQVAINAIQELAAEAGKPRWDWQAPAENT
ALKDAMASGFEAKVGEAYRITDKMQRQDALAALKDEAVEQLAGEEDGKFDADEVKGAFAS
LEKRVVRSRVVKGEPRIDGRDLKTVRPLDIEVGSLPKTHGSAIFTRGETQAVVVATLGTL
RDAQLIESLEGERKDRFLLHYNFPPYCVGEAGFMGGPKRREIGHGRLARRGVEAMLPSED
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPMKAPVAGIAMGLVKDEDGFAVLT
DILGDEDHLGDMDFKVAGSAEGVTALQMDIKIEGINEEIMEQALQQAHEARLHILEQMNT
VIGQSREEVSENAPSMATIKIDPEKIRDVIGKGGAMIRKICEDTGASIDLDDDGTVRIYA
EEKSAAKAAIDTVLAITAVPEIGKLYRGKVVRIADFGAFVNIIPGTDGLVHISQIVPERV
NDVRDYLNEGDEPIVKVLDIDNRNRVKLTIKEITPEEKAAFEAEAADAEL
NT seq 2133 nt   +upstreamnt  +downstreamnt
gtgaatccggtcaagaaaacatttgaatacggtcgcagtaccgtcaccctggaaaccggg
cgtatcgcccgccaggcctccggtgccgtgatggtcaccatggacgacaccgtggtgctg
tgcaccgtggtggcgaagaaggacgtcaatccctcccagcccttcttcccgctctccgtc
cattaccaggagaagacctacgcggtcggcaagattcccggcggcttcttcaagcgcgag
gggcgtcccaccgagaaggaaactctcacctcgcgcctcatcgatcgcccgattcgcccg
ctgttccccaaggggttcatgaacgaggtccaggtcatctgcacggtgctctccaccgat
cgcaaccatgacccggatatcgccgccatgatcggtacgtccgcggccctggcgatttcc
ggtgtgcccttcaacggtcccatcggcgcggctcgtgtcggcttcaccgaggaacacggt
tacttcctcaacccgtccgtcgaggaactggccagttccgagctcaacatggtggtggcc
ggcaccgagaaggccgtgctgatggtcgagtccgaagccaacgagctgctcgaggacgag
atgctgggtgcggtgctctatggccaccaggaaatgcaggtggcgatcaacgccatccag
gaactcgccgccgaggccggcaagccgcgctgggactggcaggctcccgccgagaacacg
gcgctcaaggacgccatggccagcggcttcgaagccaaggtcggcgaggcgtatcgcatc
accgacaagatgcagcgtcaggatgccctggccgccctgaaggacgaggcggtggagcaa
ctggccggcgaagaggacggaaagttcgatgccgacgaggtcaagggcgctttcgccagc
ctcgagaagcgcgtggtgcgcagtcgcgtggtcaagggcgagccgcgtatcgatggccgc
gacctgaagaccgtgcgccccctggatatcgaagtcggcagcctgcccaagacgcatggc
tcggcgatcttcacccgtggcgagacccaggccgtcgtggtggcgacgctggggaccctg
cgtgatgcccagttgatcgaatcgctggaaggggagcgcaaggatcgcttcctgctgcac
tataacttcccgccctactgcgtgggcgaggccggtttcatgggtggtcccaagcgtcgc
gagatcggccatggccgcctggcacgccggggcgtggaggccatgttgccttccgaggac
gagttcccctacaccatccgggtggtttccgagatcaccgaatccaacggctccagctcg
atggcctcggtgtgcggctcctcgctggccctgatggacgccggcgtgccgatgaaagcg
ccggtggcgggcatcgccatgggcctggtcaaggatgaagacggcttcgccgtgctcacc
gatatcctgggcgacgaggaccacctcggcgacatggacttcaaggtggccggtagcgcg
gaaggcgtgaccgccctgcagatggacatcaagatcgagggcatcaacgaggagatcatg
gagcaggcgctgcagcaggcccatgaagcccgtctgcacatcctcgagcagatgaacacg
gtgatcggccagagtcgtgaggaagtctccgagaacgcgccgtcgatggccaccatcaag
atcgacccggagaagatccgtgatgtcatcggcaagggtggcgccatgatccgcaagatc
tgcgaggataccggcgcttccattgacctggatgacgacggcaccgtacgcatctatgcc
gaggagaagtcggcggccaaggcggccatcgacaccgtactggccatcaccgccgtgccc
gagatcggcaagctgtatcgcggcaaggtagtgcgcatcgccgacttcggtgccttcgtc
aatatcatccccggcaccgatggcctggtgcacatctcgcagatcgtgcccgagcgggtc
aacgacgtgcgcgattacctgaacgaaggtgacgagccgatcgtcaaggtgctcgacatc
gacaatcgcaaccgggtgaagctcaccatcaaggagatcacccccgaagagaaggcggcc
ttcgaagccgaagcggccgacgccgagctgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (111)   
   KEGG ORTHOLOGY (1)   
   RefGene (108)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (126)   

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