KEGG T01911: HPF32

Helicobacter pylori F32: HPF32_0483

Entry

HPF32_0483        CDS       T01911

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

heq Helicobacter pylori F32

Brite

KEGG Orthology (KO) [BR:heq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:heq03032]
    HPF32_0483 (gyrB)
   03400 DNA repair and recombination proteins [BR:heq03400]
    HPF32_0483 (gyrB)
Enzymes [BR:heq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPF32_0483 (gyrB)
DNA replication proteins [BR:heq03032]
Prokaryotic type
  DNA Topoisomerases
   HPF32_0483 (gyrB)
DNA repair and recombination proteins [BR:heq03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPF32_0483 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3

Other DBs

NCBI-ProteinID:

BAJ58065

Position

515141..517462

AA seq 773 aa
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKLLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPVIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDEN
IKTRESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSFDMKVLEKSILEKLEGLNYQILRSFATEESLHLHVQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV

NT seq 2322 nt +upstreamnt +downstreamnt
atgcaaaattaccagagccatagtattaaggttttaaaaggtttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgattaatatcact
ttgactgatgagggttcttgcattgtagaagataacgggcgaggcattcctgtagatatt
caccccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaactcttgattatgaccattaaaaaagagggtcaaatctaccgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaagcgcttcaaagaaatggcgtatcttaatgacggc
ttaaaaatttctttcaaagaagaaaaaacccagttgcaagagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaattgctcacccccgttatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctctagcgtatgctgat
gattacaatgaaaacactttaagctttgtgaataacattaaaacttctgagggcggcacg
catgaagcgggctttaaaatgggcttgtctaaggcgattttacaatatattgatgaaaac
attaagacaagagaatcgcgccccatctctgaggacattaaagagggcttgatcgcggtc
gtgagcttgaaaatgagtgagcctttatttgaagggcagactaaatccaaactcggtagt
tcgtatgcgcgcgcgttggtttcaaaattagtctatgataaaatccaccaatttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagcccttttagctgcaaaagccaga
gaagccagtaagaaagccagagaacttacaaggaaaaaagataatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagtgagatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaaaatcctg
aaatcagaagagattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgttgatgacttttttctatcgttatttacgcccactgattgaa
caagggcatgtttatatcgctcaagcccctctttataaatacaagaagggcaagacagaa
atctatcttaaagacagcgtcgctttggatcatttcttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcgcgccat
taccgctacgcgcttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgaaactaaggacgccttaagctttgatatgaaagttttggaaaaaagcatttta
gaaaaattagagggcttgaattatcagatcttacgctcttttgctactgaagaaagcttg
catttgcacgtgcaaacccctaagggcttggtggaatttaacctggatgacaacctcttt
aaagaagtgttgtttgaagaagcgaattacacttaccaaaaacttatggaatataattta
gacttcttagaaaataaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aaaggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgcagcttgatcaaactcaaaattgaagatttagaa
aaaactgatgcagtcttttcgctttgcatgggcgatgaggtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaaacagctagatgtgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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