KEGG   Helicobacter pylori SouthAfrica7: HPSA_06360
Entry
HPSA_06360        CDS       T01921                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hes  Helicobacter pylori SouthAfrica7
Pathway
hes03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPSA_06360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hes03021]
    HPSA_06360
   03400 DNA repair and recombination proteins [BR:hes03400]
    HPSA_06360
Enzymes [BR:hes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPSA_06360
Transcription machinery [BR:hes03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPSA_06360
DNA repair and recombination proteins [BR:hes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPSA_06360
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Enkurin Myb_DNA-bind_4
Other DBs
NCBI-ProteinID: ADU85240
UniProt: E8QTE7
Position
complement(1305312..1306346)
AA seq 344 aa
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPIGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEQIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSEITRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGEKPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLSDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggtaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
caccctattagaaggctcttgcttttaagctcggtggggtatgctcctataggtttaaaa
attgaaggcgttcatcatgagtttgattcattaagaggcgttactgaagacgtgtcgctt
tttatcatgaatttaaagaatatccgttttatagccaaggcgctagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttaaattctgagcagatagaaatcgtcaatcctgaaatgcctctagccacg
atcaacgaagacgctcagttgaatttttcgctcatcatttataaaggaatggggtatgtc
ccaagcgaaatcacaagagagttgatgcctgaaggttacatgccgctagatggctctttc
acgccgattaaaaatgtggtttatgagattgaaaatgttttggttgagggcgatcctaac
tatgaaaaaatcatctttgatattgaaacagacgggcaaattgacccttataaagcgttt
ttgtcagcggtgaaagtgatgagcaaacaactaggcgtttttggtgaaaaacccattgcc
aacacggagtattcaggcgattacgcccaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactggttttaatgagcgaagaagagcttaagggcgtgaaaaacatgggc
aaaaaatcctatgatgaaatcgcagaaaaattgagtgatttgggctatcctgtaggcaca
gaattaagccctgaacaaagagagagtttgaaaaaaagattagaaaaattagaagataaa
ggaggcaatgactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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