KEGG   Helicobacter pylori F57: HPF57_0533
Entry
HPF57_0533        CDS       T01912                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hex  Helicobacter pylori F57
Brite
KEGG Orthology (KO) [BR:hex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hex03032]
    HPF57_0533 (gyrB)
   03400 DNA repair and recombination proteins [BR:hex03400]
    HPF57_0533 (gyrB)
Enzymes [BR:hex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPF57_0533 (gyrB)
DNA replication proteins [BR:hex03032]
 Prokaryotic type
  DNA Topoisomerases
   HPF57_0533 (gyrB)
DNA repair and recombination proteins [BR:hex03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPF57_0533 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: BAJ59607
UniProt: E6NR41
Position
542959..545280
AA seq 773 aa
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSAKKELLTPVIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDEN
IKTRESRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSFDMKILEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAVFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcaaaattaccagagccatagtatcaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgattaatatcact
ttgactgatgagggttcatgcattgtagaagataatgggcgaggcattcctgtagatatt
caccccacagaaaaaatccctgcttgcaccgtggttttaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttaagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaagcgcttcaaagaaatggcgtatcttaatgacggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctatgaagac
ggcttgaaacaattcgttaaagacagcgctaaaaaagaactgctcacccccgttatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaagtcgctctagcgtatgctgat
gattacaatgaaaacactttaagctttgtgaataacatcaaaacttctgagggtggcacg
catgaggcgggctttaaaatgggcttgtctaaggcgattttacaatatattgatgaaaac
attaagacaagagaatcccgccccatttctgaagacattaaagagggcttgattgcggtt
gtgagcttgaaaatgagtgagcctttatttgaagggcagactaaatccaaactcggtagt
tcgtatgcgcgcgcattggtttcaaaattagtctatgataaaatccaccaatttttagaa
gaaaaccctaacgaagccaaaatcattgccaataaagcccttttagccgcaaaagctaga
gaagccagtaaaaaagccagagagcttacaaggaaaaaagataatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagacccattagagagtgaaatcttttta
gtggagggcgatagcgcaggtgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcccttaaaaggtaagattttaaatgtggaaaaaagccatttgtcaaaaatcctg
aaatcagaagaaattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgtccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaagggcaagacagaa
atctatcttaaagacagcgtcgctttggatcatttcttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcacgccat
taccgctacgcgcttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgaaactaaggacgctttaagctttgatatgaaaattttagaaaaaagcattttg
gaaaaattagagggcttgaattaccagattttacgctcttttgctactgaagaaagcttg
catttgcacgcgcaaacccctaaaggcttggtggaatttaacctagatgacaacctcttt
aaagaagtgttgtttgaagaagcgaattacacttaccaaaagcttatggagtataattta
gatttcttagaaaataaggatattttggcgtttttagaagaagtggaaaatcacgctaaa
aagggagcgaatatccagcgttataaggggcttggtgagatgaaccctaatgatttgtgg
gaaacgaccatgcataaagaaaaccgtagcttaatcaaactcaaaattgaagatttagaa
aaaaccgatgcagtcttttcgctttgcatgggcgatgaggtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaaacagctagatgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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