KEGG   Helicobacter pylori F57: HPF57_1249
Entry
HPF57_1249        CDS       T01912                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hex  Helicobacter pylori F57
Pathway
hex03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPF57_1249 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hex03021]
    HPF57_1249 (rpoA)
   03400 DNA repair and recombination proteins [BR:hex03400]
    HPF57_1249 (rpoA)
Enzymes [BR:hex01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HPF57_1249 (rpoA)
Transcription machinery [BR:hex03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HPF57_1249 (rpoA)
DNA repair and recombination proteins [BR:hex03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HPF57_1249 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Enkurin Myb_DNA-bind_4
Other DBs
NCBI-ProteinID: BAJ60323
UniProt: E6NT57
Position
complement(1335275..1336309)
AA seq 344 aa
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPDQRESLKKRLEKLEDKGGND
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgttagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggctcttgcttttaagctctgtggggtatgctcctgtaggtttaaag
attgaaggcgtccatcatgagtttgactcattaagaggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgaattctgagcatatagaaatcgtcaatcctgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccactagacggctctttc
acgccgattaaaaatgtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactgggcgtttttggcgaaagacccattgct
aatacggagtattcaggcgattacgcccaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagtgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaaaggcgtgaaaaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaacgatttgggctatccggtaggcaca
gaattaagccctgatcaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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