KEGG   Helicobacter pylori BM012S: U064_1541
Entry
U064_1541         CDS       T02940                                 
Name
(GenBank) Type III restriction-modification system restriction subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hez  Helicobacter pylori BM012S
Brite
KEGG Orthology (KO) [BR:hez00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hez02048]
    U064_1541
Enzymes [BR:hez01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     U064_1541
Prokaryotic defense system [BR:hez02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   U064_1541
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD SWI2_SNF2 PapB
Other DBs
NCBI-ProteinID: AHA90439
UniProt: V5NPW6
Position
complement(1569061..1571967)
AA seq 968 aa
MKIKFKRLDYQEQCRDQILGVFKGIYLREPENDAQRISNPVFEIGAIKDLLLENIENLRS
KQKITQGSVGIDKLLNCDILMETGTGKTFCFLECVYALHKNYHLSKFIVLTPSNAIKLGV
LKSVEITREFFKSEYSTHLESYEDIERFILASNHKCCVLVMTFSAFNKEKNTINKSCLEN
TNLFNGAKSYMQALASMRPIVIMDEPHRFLGDKTKKYLEQLNALITLRFGATFKDDYNNL
IYALDSKKAFDCALVKSISVASVGESHECFLELKEANKKQNEATINYTDLENKTKSVKVK
EHDNLGTLTQISALEDYIVEKITKKEVCFLNGVNLLLDQREPFSHLLEGEQEVMLKEAIK
SHFEREEGLFKKGIKALCMVFISGVNSYLSENEKPAKLALLFEKLYRQKLEEVLKKPLDE
NYRAYLERTKDAILKVHGGYFAKSKKDSDETQVIALILKEKEKLLSFDSDLRFIFSQWAL
QEGWDNPNVMTICKLASSHSNITKLQQIGRGLRLAVNDKGERITKEHADFDFVNELVVIV
PQVEGDFVGAIQQEISEHSLIKQVFSAEELEKSGIVKKGYYGFLFETLEGLGFGEKTGDE
NFKLTLNQSEFLKKEPELENLKNEKYLDFEKLKDFLKDRLVGNLRVRNKNERKTERIKIN
KENFKKFETLWKGLNHQARIAYAIDSESLIDEIVKNINSSFNVSSKRISVTTHKKVETMG
NNAKTEMFERESACVWSLHEFISALSNKVKLSFKSVAKVLEKIDENKFDLIKKNEQEGLR
RLEELFLEIIYQNIKDKISYQMRETTIKNRKNDAFYDEKGEIREFLDGSLGVDKYEIKNS
SAQEKCLYENFMQVDSEIEKDTIEESNDTKIIVFGKLPRVKIPVGLDQTYSPDFGYVVEN
NDKKVLLVVETKGVECENELREEEKCKISTAKKFFEALKKQGVNIEYKTKMRKDQLSALI
NEVLNRKD
NT seq 2907 nt   +upstreamnt  +downstreamnt
gtgaaaatcaaattcaaacgattggattatcaggagcaatgccgggaccaaattttaggg
gtgtttaaggggatctatttaagagagccagaaaatgacgctcaaaggatttctaaccct
gtttttgaaataggagcgatcaaagatcttttattagaaaatattgagaatttgcgatcg
aaacaaaaaataacccaggggagcgtggggattgacaagttgttaaactgcgatatttta
atggaaacaggcacagggaagaccttttgctttttggaatgcgtttatgctttgcacaaa
aactaccatttgtcaaaattcatcgttttaacgccaagcaacgccattaaattaggggtt
ttaaagagcgttgaaatcaccagagaattttttaaaagcgagtattctacgcatttagaa
agctatgaagatatagaaagatttattttggcgagtaaccacaaatgctgcgtgttggtg
atgactttttctgccttcaataaagagaaaaacactatcaataaatcatgcttagaaaac
acgaatctattcaatggtgcaaaaagttacatgcaagctttagcgagtatgcgccccatc
gtaatcatggacgaaccgcaccgatttttaggcgataaaacaaaaaaatatttggaacaa
ttaaacgctttaatcacgctcaggtttggggcgacttttaaagatgattataataatctg
atttatgcgctagacagcaaaaaagcgtttgattgcgccctagtgaaaagcattagcgtg
gcgtctgtgggggagagtcatgagtgttttttagagcttaaagaggctaacaaaaaacaa
aatgaagccacgatcaattacacggatttagaaaataaaactaaaagcgtcaaagtcaaa
gagcatgataatttaggcacgctaactcaaatcagcgctttagaagattacattgtagaa
aaaatcactaaaaaagaggtgtgttttctcaatggcgttaatttgttgctggatcaaaga
gagcctttttctcatcttttagagggtgaacaagaagtgatgctgaaagaagcgataaaa
agccattttgaaagagaagaagggctttttaaaaaggggattaaagccttgtgcatggtg
tttattagcggggtgaatagctatttaagcgagaatgaaaagccggctaaattagccctt
ttatttgaaaaactctaccggcaaaagcttgaagaagtcttaaaaaagcctttagatgaa
aattatagagcgtatttagagcgcaccaaagacgctattttaaaagtgcatggagggtat
tttgctaaaagcaagaaagatagcgatgaaacccaagtgatcgcgctcattttaaaagaa
aaagaaaaattgctgagttttgattccgatctcaggtttattttttcgcaatgggcgttg
caagaggggtgggataaccctaacgtgatgacgatttgcaaattagcctctagccattct
aatatcactaaattgcaacaaattggtagggggttaaggctcgctgtgaatgataagggc
gaacgcatcactaaagagcatgctgattttgattttgtcaatgaattagtcgtgatcgtg
ccgcaagttgagggggattttgtgggagcgatccagcaagagataagcgaacatagcttg
attaaacaagtatttagcgcagaagagttagaaaaaagcggcattgttaaaaaagggtat
tatgggtttttatttgaaacattagagggtttgggttttggagaaaaaacaggtgatgaa
aactttaaactcactctcaatcaaagcgaatttttaaaaaaagagccagaacttgaaaat
ttaaaaaatgaaaaatacttggattttgaaaaattaaaagattttttaaaagatcgctta
gttggcaatcttagagtgaggaacaaaaacgagcgaaaaactgaaagaatcaaaatcaat
aaagaaaattttaaaaaatttgaaaccttatggaagggtttgaaccatcaagcccgaatc
gcttatgccattgatagcgagagcttgattgatgagattgtcaaaaatattaattcttct
tttaatgttagttcaaaaagaatttcggttacgacgcataaaaaagtagaaactatggga
aataacgccaaaacagagatgtttgagcgagaaagcgcatgcgtgtggagcttgcatgaa
tttatcagcgccttgtctaataaggtgaaattgagttttaaaagcgtggctaaagtgttg
gaaaaaattgatgaaaacaaatttgatctcattaaaaaaaacgaacaagagggcttaagg
cggttagaagagctatttttggaaatcatttatcaaaatattaaagataaaatctcctat
caaatgcgcgaaacgacgattaaaaacagaaaaaacgatgcgttttatgatgaaaaagga
gaaattagagagtttttagacgggagtttgggggtggataaatatgagattaaaaattca
agcgctcaagaaaaatgcctgtatgaaaatttcatgcaagtggatagcgagattgaaaaa
gacacgattgaagaatctaacgacactaaaatcattgtttttggcaagctccctagggtt
aaaatcccagtagggttagatcaaacttatagccctgattttgggtatgtggttgaaaac
aacgataaaaaagtgttgttagtggtagaaactaagggggttgaatgtgaaaacgaattg
cgcgaagaagaaaagtgcaaaatttcaaccgctaagaaattttttgaagctttaaaaaag
caaggcgtgaatattgaatacaaaaccaaaatgagaaaagatcaattaagcgcattgatt
aatgaggttttaaatcgtaaagattag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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