KEGG   Heterocephalus glaber (naked mole-rat): 101701527
Entry
101701527         CDS       T02812                                 
Symbol
Tarbp1
Name
(RefSeq) TAR (HIV-1) RNA binding protein 1
  KO
K15333  tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hgl03016]
    101701527 (Tarbp1)
   03036 Chromosome and associated proteins [BR:hgl03036]
    101701527 (Tarbp1)
Enzymes [BR:hgl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.34  tRNA (guanosine18-2'-O)-methyltransferase
     101701527 (Tarbp1)
Transfer RNA biogenesis [BR:hgl03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    101701527 (Tarbp1)
Chromosome and associated proteins [BR:hgl03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    101701527 (Tarbp1)
SSDB
Motif
Pfam: SpoU_methylase
Other DBs
NCBI-GeneID: 101701527
NCBI-ProteinID: XP_004854689
Position
Un
AA seq 1592 aa
MEWVLAEALLAQSGDPRVLLGALCRGEASAERVETLRFLLQRLEDAGAGQGALPEAAREL
AAGYLVPLLHGRPGGHDPGPPRSRRRVLRAAGAALRSCARLAGSPPLAAALAEEALRELR
AGRPPGAEAALEILAAVAPCLRPHEDGALLERVAQAAVALALDAEGPGRAEGAAALVTAL
GKGGGVALTAVWGALASSGNRSEPGRVGPELRLLSALAEKLLPEPGACDAGPDARRCGRF
WRTVQAGLGCAEDALTRKRARYLLQRAVEVSAERGVGCTCGPQEGTGPSLFWWSKKKKDE
LLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEYAVSEENGCWLFHPSWHLCIYKRMF
ESENKILTKEGIIHFLELYETVALPFSLEFSEFIIGPLMDALSESSLYSRPTGQLVGSGS
PLGLKLQKFLVTYVSLLPEEIKSNFLLKFLQKMRSRHWCAVPILFLSKALANIPRCKALG
LEGLLALRDVIQCTMITHHILLRGAAQCFLLQTAMHLVDVEKVSLSDVSSFLISLKQEES
LGRGTTLWTELCDWLCVNERSFRPSSICGPDGLPETSLNAYVKNLVQEYITSPAWETGES
CFMPDWSEARLTALMILLAVDVEGMKIEYSEKRRTQNVLRIFLDPLLDALVKLGTNAYVP
LLRTDRSLQLLVKLLHTCMLKGSSPQDDEVSAFLQSSIMSATESISQFVLRRLTMRELQK
VADLDRCHLYLMLLTELTNLHLKAGWKRAYSIFRVLSPLKNASMRHLQEMESGKELSLGD
QIQKVVSMATLATVCEASTLQPVPELDSLDAEPMDRFLSAFPFNQTLQKPRAEEQGQCAH
PMESSSFFEESSSQGWGRVVAQYIHDQWVCLSFLLEKYHTLVPATDGTIPEPLLPAIQMP
AQTLRSALDTLSILPSEQVLPVFRCMKVLVPKLLTSAESLCIESFDMAWKIISSLSNTQL
TFWPNLKGFVQFVFDNRVLTIAAKIKSQAYFKIKEIMYKIIEMSAIRTGIFNILISYCCQ
SWIVSDSKRSLFSAKNYSELVLEACIFGTVFRRDQRLIQDVQTFIENLGQDCAANVVMEN
TKREDYYVRICAVKFLCLLDGSNASHKLFIEDIAMKLLDKDELVSKTRTRYYENSLQHRV
KNRIWQTLLVLFPSFDQNFLNGIIDKIFHAGFTNNQASIKYFIEWIIILILHKCPQFLPK
FWDCFSYSEEKLKTSICTFLSVLSHLGIIVQNIPDKTPLLKQALLIALQWCLSHNFSVRL
YALVALKKVWDVCKALGVEEYNAWTTVIERSLSQAESMQGAGNAKKNWQRIQEHFFFATF
HPLEDYCLETIFYILPRLSGVIEEEWIAVGKFANFADIPSNTGSQWYFSRTPLSELSPGD
WSQQDIGSNMSEAASQSEWADVQKKIIPWRQEGLDADLGLEFQDRAARLGKSVSRLIVVA
SLINKPTNLGGLCRTCEVFGAAALVLGSLQCVGDKQFQHLSVSAEQWLPLVEVKPAQLID
YLQLKKTEGYTIIGVEQTARSSDLAQYCFPEKSLLLLGNEREGIPANLIQHLDVCVEIPQ
QGVIRSLNVHVSGALLIWEYTRQQLLRRADPS
NT seq 4779 nt   +upstreamnt  +downstreamnt
atggagtgggtgctcgcggaggcactgctcgcgcagagcggggacccccgggtccttctc
ggggctctgtgccgaggggaggcatcggcggagcgcgtggagacgctgcgtttcctcctg
cagcgtcttgaggacgcgggcgcggggcagggcgcgctcccggaggcggcgcgcgagctg
gccgcgggttacttggtgcccctgctgcacggccgccctggcggtcacgaccctggtccc
ccgcggtcccggcggcgcgtgctgcgggcggcgggcgcggcgctacggtcgtgcgcccgg
ctcgcaggttccccgccgttggcagccgcactggcagaggaggcgctgagggagctgcga
gctgggcgcccaccgggcgccgaagcggccctggagatactggcggctgtcgcgccctgc
ctgcggccccacgaggacggcgcgctgctggagcgcgtggcgcaggccgccgtggccctg
gcgctggacgccgaagggccgggtcgcgctgagggcgcggcggcgctggtgaccgcgctg
ggcaagggcggcggcgtggcgctgacggccgtttggggagcgctggcgtcctcagggaac
cgctctgagccaggccgtgtcgggcccgagctgcggctgctcagcgcgctggctgagaaa
ctgctgcccgaacccggcgcgtgcgacgcgggccccgacgcacggcgctgcggacgcttc
tggaggacggtgcaggcgggtctgggctgtgccgaggacgccctgacgcgcaagcgcgcg
cgctacctactgcagagggccgtggaggtgtctgcagagcggggcgtcggttgcacctgc
ggcccccaggaaggaactggcccaagtctgttttggtggtctaagaagaaaaaagacgag
cttctaaaattttgggaaaattatattttaattatggaaactctagaagggaatcagata
catgttataaagccagtcttaccaaagctaaacaatctgtttgaatatgcagtgtcagaa
gaaaatggctgttggctctttcacccctcctggcatctgtgtatttataaaagaatgttt
gaaagtgaaaataaaatcctgaccaaagaaggcatcattcattttttggagctgtatgaa
acagtggctcttccattctcactggaattttctgagtttattattggaccattaatggat
gcactttcagagagctcattgtatagcaggcccacaggccagcttgtaggaagtggttct
ccattgggattaaaattacagaagtttttagtcacttatgtttctctccttccagaagaa
ataaagagtaatttcctattaaagtttcttcagaagatgaggagtagacattggtgtgct
gttcccattttgttcctgtctaaggcattggcaaatatcccaagatgtaaagccctgggt
ctagaagggcttcttgctctcagggatgtcatccagtgtactatgattacacatcacatt
ctattgagaggagcagcacagtgcttcctgcttcaaacagcgatgcatttggtggatgtg
gagaaagtatcactgtctgatgtctccagttttctcatctctctgaaacaagaagaatct
ttaggacgaggaaccaccttgtggacagagctctgtgactggctgtgtgtcaatgagagg
tctttcaggccatcctctatctgtggccctgatggacttcctgaaacatctctgaacgct
tatgtgaagaacctggtccaagagtacattacatcacctgcttgggaaacaggagaaagc
tgttttatgcctgactggtctgaggccaggctgactgctctgatgatcttgctagctgtg
gatgtggaaggaatgaagattgagtacagtgaaaagcggagaacacagaatgtgttgagg
atattcttagacccccttctggatgccctggtgaagctgggtaccaatgcctacgtgcct
ttgctgaggactgacagaagcctgcagttgctggtgaaattgttgcacacttgcatgttg
aaaggttccagcccccaagatgatgaggtgtctgcttttctccagagctccatcatgtct
gccaccgagagtatttctcagtttgtcctcagaagactaaccatgcgtgagcttcagaaa
gttgcagatctggatcgttgccatttatacctcatgctgttaactgagctcacaaacctc
catctgaaggcagggtggaaaagggcctactccatcttcagagtactttctcctttgaaa
aatgcatctatgcggcatcttcaagagatggaaagtggaaaggagctgagtcttggtgat
cagatccagaaggtggtcagtatggctactttggccacagtctgcgaggccagtaccctg
cagccggtgccagagctggattcccttgatgctgagcccatggacaggttcctatctgct
tttccatttaatcagacgctgcagaagccccgtgcagaggagcagggccagtgtgctcac
cccatggagagcagcagtttctttgaagagtcatcctcccaaggatgggggagagtggtt
gcacagtacatccatgatcagtgggtctgcctctccttcctgttggaaaaataccacacc
ctggttccggccacagatggcaccattccagagcccttgctgcctgccatccagatgcct
gctcagactctgcggtctgcactggacaccctctccatcctcccttctgagcaggtgctg
cctgtgttccgttgcatgaaggtgctggttcccaagctcctgacatctgctgaatcactc
tgcatagagtcttttgacatggcctggaaaatcatatcttctttaagcaacactcagctg
acattctggcctaatctaaagggttttgttcagtttgtttttgataacagagttctcacc
attgctgccaaaatcaagagccaggcatatttcaaaataaaagagattatgtacaagata
atcgaaatgtctgccataagaactggaatcttcaatatactgatcagttactgctgccaa
tcttggatagtgtctgactccaagcgatctttgttcagtgccaaaaattacagtgaactt
gtcctggaggcttgtatatttggaactgtgtttagacgtgatcagagacttattcaggat
gtacaaaccttcatagaaaatcttggacaggactgtgcagcaaatgttgttatggaaaat
actaaaagagaagactattatgtgagaatctgtgctgtcaaattcttgtgtttattagat
ggctcaaacgcatcccacaagttgttcatagaagatattgcaatgaagctattggataaa
gatgagttggtgtctaagactagaactcggtactacgagaattctctccagcatcgtgtg
aagaaccggatatggcagactctgctcgtactttttcccagctttgatcagaatttcttg
aatggaattattgacaagattttccatgctggtttcactaacaatcaagcttccataaaa
tattttatagaatggattattatattaattcttcataaatgccctcaatttcttccaaag
ttctgggattgcttttcttatagtgaagaaaaacttaagacaagcatttgtacatttcta
tcagttttgtcccatttgggcatcattgttcaaaatattccagataaaacaccgcttctg
aagcaggccctcctcatcgcgctgcagtggtgtctcagccacaacttcagtgttcgactg
tatgctcttgtggctctcaagaaagtctgggacgtgtgcaaagcactaggtgttgaagag
tataatgcatggaccactgtcatcgagcgcagtctcagccaagcggagagcatgcaggga
gcagggaatgccaagaagaactggcaacgcatccaagagcatttcttttttgcaacattt
catccactggaggattactgtctggagaccatattttacatccttccacggctttcaggt
gtcattgaagaggagtggatcgctgttggtaaatttgccaacttcgcagacatcccttcc
aacacaggatcccagtggtacttctctcggactccacttagtgagctcagtccaggggac
tggtctcagcaggacataggttctaacatgagtgaagcagccagccaatcagagtgggct
gacgtccagaaaaagatcatcccttggagacaagagggtctcgatgcagacctggggctc
gagtttcaggatcgcgccgccagactcggaaagtcagttagcagactgattgtggtggcc
tcactcatcaataagccaaccaatttaggaggtctgtgccggacctgcgaggtctttggg
gccgcggcgctggtcctgggcagtctgcagtgtgtcggtgacaagcagtttcagcacctc
agcgtctctgcagaacagtggcttcctctggtggaagtgaaaccagctcagctaattgat
tacctgcagctgaagaaaacagaaggttacaccatcattggggtggagcagacggccaga
agctccgacctggcccagtactgctttcctgagaagtcgctcctcctgctgggcaatgaa
cgtgaaggaatcccggcaaacctgatacagcatttggatgtgtgcgtggagatcccacag
cagggcgtcatccgctcgctgaatgtgcatgtgagcggagccctgctcatctgggagtac
actaggcagcagctgctcaggcgcgcagacccatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (1)   
   Pfam (1)   
All databases (71)   

Download RDF
DBGET integrated database retrieval system