KEGG   Heterocephalus glaber (naked mole-rat): 101706423
Entry
101706423         CDS       T02812                                 
Symbol
Smarca2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03082  ATP-dependent chromatin remodeling
hgl04714  Thermogenesis
hgl05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101706423 (Smarca2)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    101706423 (Smarca2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    101706423 (Smarca2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hgl03021]
    101706423 (Smarca2)
   03036 Chromosome and associated proteins [BR:hgl03036]
    101706423 (Smarca2)
Transcription machinery [BR:hgl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     101706423 (Smarca2)
Chromosome and associated proteins [BR:hgl03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     101706423 (Smarca2)
  Chromatin remodeling factors
   BAF complex
    101706423 (Smarca2)
   PBAF complex
    101706423 (Smarca2)
   GBAF(ncBAF) complex
    101706423 (Smarca2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK ResIII HDA2-3
Other DBs
NCBI-GeneID: 101706423
NCBI-ProteinID: XP_004838270
Position
Un
AA seq 1590 aa
MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHQMPAM
GSADFPQEGMHQLHKPMDGMLDKGIVEDLHCTTMKGTGMRPPHPGMGPPQSPMDQHSQGY
LSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDPQTMNQANRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQATPQPQPQPQPQQQPVLVNYSRPSGPGLEVVSGTSTPQKLQVP
VTSGRPSPAPPATAPPTNAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEI
LQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRR
DTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDF
KEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKK
DRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGE
PIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDY
EEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYY
TVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIAL
ITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGK
FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGT
PLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVL
RPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGA
KTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKL
RATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIF
LLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE
KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQM
IARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEK
IFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVE
KAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYY
ELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK
SARQKIAKEEESEEESNEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNR
GKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq 4773 nt   +upstreamnt  +downstreamnt
atgtccacgcccacagacccagctgcaatgccccaccctgggccctcgccagggcccgga
ccttctcctggaccgattctgggacccagtccaggaccaggaccttccccaggctccgtc
cacagcatgatggggccaagtcctgggccccccagcgtctcacatcagatgccagccatg
ggctctgccgacttccctcaggaaggcatgcatcagctgcataaacccatggatgggatg
ctcgacaaggggattgtggaagacctccattgtacaaccatgaagggcactggtatgcga
cctcctcacccaggaatgggccctccccagagtcccatggatcaacacagccaaggttat
ctgtcaccacacccatctccgttgggcgccccagaacacgtctccagccctatatctgga
ggaggcccaacgccgccccagatgccaccaagccagccaggacctcttatcccaggtgat
ccacaaaccatgaaccaggccaacaggggtccctcgcctttcagtcctgtccagctgcat
cagctgcgggcccagattttagcttacaaaatgctggcccggggccagcccctccctgaa
acactgcagcttgcagtccaggggaaaaggacactgcctggcatgcagcagcagcagcag
cagcaacaacaacaacaacaacagcagcagcagcagcagcaacaacaacaacaacagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaggcaacacca
cagccgcagccacaaccacagccgcagcagcagccagtgcttgttaactatagcagacca
tctggcccaggactggaggtggtgagcgggaccagcaccccgcagaagctgcaggtgccc
gtgaccagtggccggccctctcctgcaccccctgccaccgcaccgcccaccaatgctgtg
cctggcccctctgtccagcagccagccccgggacagccctcgcctgtccttcagctgcag
cagaagcagagccgcatcagccccatccagaagcctcagggcctggaccccgtggaaatc
ctgcaggagcgggagtacagacttcaggcacgcatagctcataggatacaagaactggaa
aatctacctggctctttgccaccagatttacgaaccaaagcgaccgtggaactgaaagca
cttcggttactcaatttccagcgtcagctgagacaggaggtggtggcctgcatgcgccgg
gacaccaccctcgagacagccctcaactccaaagcctacaaacggagcaagcggcagact
ctgcgagaagcacgcatgactgagaagctggagaagcagcagaagattgagcaggagcga
aagcgccggcagaaacaccaggaatacctgaatagtattttgcaacatgcaaaagatttt
aaggaataccatcgatccgtggctgggaagatccagaaactttccaaagcagtggcaacc
tggcatgccaatactgaaagggagcagaagaaggagacagagcggattgagaaggagaga
atgcggagactaatggctgaagatgaagagggctacaggaaactgatcgatcaaaagaaa
gacaggcgtttagcctaccttttgcagcagactgacgagtatgtggccaatctcaccaac
ttggtttgggagcacaagcaagcccaagcggccaaagagaaaaagaagaggaggaggagg
aagaagaaagctgaagagaatgcagagggaggggagtctgccctaggaccggatggagag
ccaatagatgagagtagccagatgagtgatctgcctgtcaaagtgacgcacacagaaact
ggcaaggtcctgttcggaccagaagctcccaaagcaagtcaactggatgcctggttggaa
atgaaccctggttacgaagttgcccctagatctgacagtgaagagagtgattctgactac
gaggaggaggatgaggaagaagagtccagtaggcaggaaacagaagagaaaatccttcta
gatcccaacagtgaagaagtttctgaaaaggatgctaaacagataatcgagacagcaaag
caagatgtggatgatgagtacagtatgcagtacagtgccagagggtcccagtcctactac
actgtggctcacgccatctcagagagggtagagaagcagtctgccctcctcattaatggg
accctaaagcattaccagctccagggcctggaatggatggtttccttgtataataacaat
ttgaatggaatcttagctgatgaaatggggctaggcaagaccatacagaccattgcactc
atcacttacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctt
tcgactctatctaactggacatatgaatttgacaagtgggctccttcggtggtgaaaatt
tcttacaagggtacccctgcaatgcgccgctcccttgtcccccagctacggagtggcaaa
ttcaatgtcctcttgactacttacgagtacattataaaagacaagcacattcttgcaaag
attcggtggaaatacatgatcgtggacgaaggccaccgaatgaagaatcaccactgcaag
ctgactcaggtcttgaacactcactatgtggcccccagaagaatcctcttgaccgggacc
ccattgcagaataagctccctgaactctgggccctcctcaacttcctcctccctacaatt
ttcaagagctgcagcacatttgaacagtggtttaatgctccatttgccatgactggagaa
agggtggacttaaatgaagaagaaaccatactgatcatcaggcgtcttcacaaggtgctg
agaccatttttattgaggagattgaagaaagaagttgaatctcagcttccagaaaaagtt
gaatatgtgatcaagtgtgacatgtcagctctacagaagatcctctatcgccacatgcag
gccaagggcatcctcctcacagatggctctgagaaagataagaagggaaaaggaggtgca
aagactcttatgaacactatcatgcagctgagaaagatctgtaatcacccctatatgttt
cagcacattgaggaatcctttgctgaacacctgggctattcaaatggggtcatcaatggg
gctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtattctgccaaaactg
agagcgactaatcaccgagtgctgcttttctgccagatgacgtctctcatgaccatcatg
gaggattacttcgctttccggaacttcctttacctgcgtcttgatggcaccaccaagtct
gaagatcgtgctgctttgctgaaaaaattcaatgaacctgggtcccagtatttcattttc
ttgttgagcacccgagcaggaggcctgggattaaacctccaggcggctgacacagtggtc
atctttgacagcgactggaacccgcatcaggatctgcaagcacaagaccgggctcatcgc
attggtcaacagaacgaggtccgggtgctgagactctgcaccgtgaacagtgtggaggaa
aagattctcgcagctgcaaaatacaagctgaatgtggatcagaaagttatccaggctggc
atgttcgatcagaagtcttcaagccatgagcggagagcatttctgcaggccatactggag
cacgaagaggaaaatgaggaagaagatgaagtaccagatgatgagactctgaaccaaatg
attgcgcggcgagaagaggagtttgacctttttatgcgaatggacatggaccggcggaga
gaagatgcccggaatcccaagcgcaagcctcgcttaatggaggaagatgagctgccctcc
tggattattaaggatgatgctgaagtggaaaggctcacgtgtgaggaggaggaagagaaa
atctttggtagggggtctcgtcagcgccgcgatgtggactacagcgatgccctcacggag
aagcagtggctcagggccattgaagacggcaatttggaagaaatggaagaggaagtacgg
cttaagaagagaaaaagacgaagaaatgtggataaagatcctgcgaaggaagatgtagaa
aaagctaagaagaggagaggccgccctccagctgagaaactgtcaccaaatccccccaaa
ctgacaaaacagatgaacgccatcatcgatactgtgatcaactacaaggatagttcaggg
cggcagctcagtgaagtcttcattcagttaccttccaggaaagagttaccagaatactat
gaattaattaggaagccagtggatttcaaaaaaataaaggaaagaattcgtaatcataag
taccggagcctgggtgacctggagaaggatgtcatgcttctctgccacaacgctcagaca
ttcaatttggaaggatcccagatctatgaagactccatcgtcttacagtcagtgtttaag
agtgcgcggcagaaaattgccaaagaggaagaaagtgaggaggaaagcaatgaagaagag
gaagaggaagatgaagaggagtctgaatctgaggcaaaatctgttaaggtgaaaatcaaa
ctcaataaaaaagatgagaaaggccgggacaaagggaaaggcaagaaaaggccaaatcga
ggaaaagcaaagcctgtagtgagtgattttgacagcgacgaagaacaggatgaaaacgaa
cagtcagaagcaagtgggaccgatgatgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (8)   
   Pfam (8)   
All databases (60)   

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