KEGG   Halobacillus halophilus: HBHAL_1008
Entry
HBHAL_1008        CDS       T02031                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
hhd  Halobacillus halophilus
Brite
KEGG Orthology (KO) [BR:hhd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhd03032]
    HBHAL_1008 (gyrA)
   03400 DNA repair and recombination proteins [BR:hhd03400]
    HBHAL_1008 (gyrA)
Enzymes [BR:hhd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HBHAL_1008 (gyrA)
DNA replication proteins [BR:hhd03032]
 Prokaryotic type
  DNA Topoisomerases
   HBHAL_1008 (gyrA)
DNA repair and recombination proteins [BR:hhd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HBHAL_1008 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C NTase_sub_bind PHP Retrotran_gag_2
Other DBs
NCBI-ProteinID: CCG43395
UniProt: I0JGX7
Position
7127..9661
AA seq 844 aa
MVDQPERPRVQEINISQEMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYAMHDLGMH
SDKAHKKSARIVGEVIGKYHPHGDSAVYDTMVRMAQDFNYRYMLVDGHGNFGSVDGDAAA
AMRYTEARMSKISMEILRDINKDTIDYDDNYDGTEKEPLVLPAKFPNLLVNGGSGIAVGM
ATNIPPHQLGEVIDAVLAVSKDPDITIQDLMENHIYGPDFPTSGKILGLSGIRKAYETGK
GSITVRANVEIEEQANGKARLIVTELPYQVNKARLVEKIADLARDKKIDGITDLRDESDR
NGLRVVIELRRDANPNVLLNNLYKMTALQSTFGINMLALVKGHPKVLNLKQCLEYYLEHQ
KEVIKRRTAYELRKAEARAHILEGLRVALDHLDEVITLIRESQTTEIAKSGLMERYELSD
RQAQAILDMRLQRLTGLEREKIENEYQDLMKLIAELKAILADEEKVLEIIREELEDVKER
FNDERRTEILLGGSDFIEDEDLIPEETVIVTLTHQGYVKRLPANTYRSQRRGGRGVQGMG
THEEDFVEHLLSTSTHNTLLFFSNKGKVYKAKGYEVPEFSRTAKGIPIINMLNIERDEWI
NAVITVEDFVDDWYLLFTTRNGITKRTTLSQFANIRRGGLIALGLREDDELISVKLTDGQ
KDIMIGTKNGYLIRFNEDQIRAMGRTAAGVKGISLRDDDRVVSMEILEDDLQVLTVTSKG
YGKRTPATDYRITNRGGKGIITCNLTEKNGYVVATQAVNGEEDIMIITESGVLIRMPLES
ISETGRNTQGVRLIRLGDGEEVATVARVESEKEEEEIIEEAIEKNEDKETSSEESKEVED
TPEE
NT seq 2535 nt   +upstreamnt  +downstreamnt
atggtggatcaacccgaacgcccacgcgtgcaggaaattaatataagccaggaaatgcgt
acatccttcctggattatgccatgagtgttattgtggcacgtgccttgcctgacgtccgt
gatggtttgaaacctgtacaccgccggattttgtatgcaatgcatgatttaggcatgcat
tccgataaagctcacaaaaaatctgcccgtattgtaggggaggttatcggtaaatatcac
ccgcacggtgattcggctgtgtacgatacgatggtgcgtatggctcaggacttcaactac
cgttatatgctcgtggacggacacggaaacttcggttctgtagacggcgacgccgctgcc
gctatgcgttatacggaagcaagaatgtccaaaatttctatggagattttgcgagacatc
aataaagatacaattgactatgatgacaactatgacggtacggaaaaggaacctcttgtc
ttacctgccaaattcccgaacttactggtaaacggtggttcaggtatcgcggtagggatg
gctacgaatattcctcctcatcagctgggtgaagtgatcgatgctgtacttgccgtcagt
aaagatccggatattaccattcaggatttgatggaaaaccacatctatggtccagacttt
ccaacctctgggaaaatccttggactaagcggtattcgaaaagcttatgaaactggaaaa
ggatccattaccgtccgggcaaatgtagaaatcgaagaacaggcgaatgggaaagcacgc
ttaattgttacggagcttccgtatcaggtgaacaaagctcgtcttgtcgagaaaatagca
gatcttgcccgcgacaaaaaaattgacggcattacggaccttcgggacgagtccgaccgt
aatggtctgcgcgtcgtgatcgaattacgacgggatgctaatccaaatgtgctgttgaac
aacctctacaagatgacggctcttcaatccacatttggtattaatatgctggctctggtt
aaaggtcatccaaaagtattgaacttgaaacagtgcctggaatactatttggagcaccag
aaagaagtcatcaagcgtcgaactgcttatgaacttcgtaaagcggaagcgagagctcat
atcctggaagggcttcgagtagctctggatcatttagacgaagtgattacgctcattcgt
gagtcacaaacgactgagattgccaaaagtggtttaatggagcgttatgagctgtccgat
cgccaggctcaagctattctggatatgcgtcttcaacgtctgactggtttagaacgtgaa
aagattgaaaacgaataccaggatcttatgaagcttattgctgaattgaaagcaatcctt
gctgatgaagagaaagttctggaaattatccgggaagaactagaagacgtaaaagaacgc
tttaacgatgaacgtcgtactgaaattttgctgggcggcagtgactttattgaagacgaa
gacttaataccggaggaaacggttattgtaaccttgacgcatcaaggttatgtcaaacgt
ctccctgctaacacgtaccgttcacagcgcagaggcggacgtggtgtacaaggaatgggc
acacacgaagaggactttgtggaacatctactgtccacttccacccacaatacgctgctg
ttcttctccaataaaggaaaagtatataaggctaaaggctatgaagttcctgaattcagc
cgaacagctaaagggattccaattatcaatatgctgaatattgagcgggatgagtggatt
aatgccgtcattaccgtagaagacttcgtcgatgattggtaccttctgtttacaacaagg
aacggaatcaccaaacggacgaccctttctcaatttgcgaacatccgccgcggcggtctg
attgcactcggactgagggaagacgacgaattgatctccgtgaaactgacagatggccaa
aaggatattatgattggtaccaaaaatggttatctcatccggtttaacgaagatcaaatc
cgtgcaatgggccgtacagctgcaggtgtgaagggaatctcgcttagagacgacgaccgc
gttgtatccatggaaatcctggaggacgacctgcaggttcttaccgtcacaagtaaaggg
tatgggaagcggacaccggcaacggattaccgcattaccaatcggggcggtaaaggaatt
attacgtgtaaccttaccgagaaaaatggttatgtcgttgctacccaggccgtgaatggt
gaagaagatatcatgattatcacggaaagtggcgtgctgatcaggatgccgcttgaaagc
atttctgaaactggacggaacactcagggtgtccgcttgatccgtcttggagacggggaa
gaagtagccacggtagctcgtgtggaatcagaaaaagaagaagaagaaatcattgaagaa
gcaattgaaaagaacgaagataaagaaacatcatcagaggaatcgaaagaagtggaagac
actcctgaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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