KEGG   Haloarcula hispanica ATCC 33960: HAH_2754
Entry
HAH_2754          CDS       T01597                                 
Symbol
rpaA3
Name
(GenBank) replication factor A
  KO
K07466  replication factor A1
Organism
hhi  Haloarcula hispanica ATCC 33960
Pathway
hhi03030  DNA replication
hhi03420  Nucleotide excision repair
hhi03430  Mismatch repair
hhi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HAH_2754 (rpaA3)
   03420 Nucleotide excision repair
    HAH_2754 (rpaA3)
   03430 Mismatch repair
    HAH_2754 (rpaA3)
   03440 Homologous recombination
    HAH_2754 (rpaA3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hhi03000]
    HAH_2754 (rpaA3)
   03032 DNA replication proteins [BR:hhi03032]
    HAH_2754 (rpaA3)
   03400 DNA repair and recombination proteins [BR:hhi03400]
    HAH_2754 (rpaA3)
Transcription factors [BR:hhi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    HAH_2754 (rpaA3)
DNA replication proteins [BR:hhi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    HAH_2754 (rpaA3)
DNA repair and recombination proteins [BR:hhi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     HAH_2754 (rpaA3)
   MMR (mismatch excision repair)
     HAH_2754 (rpaA3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     HAH_2754 (rpaA3)
SSDB
Motif
Pfam: tRNA_anti-codon REPA_OB_2 CDC24_OB3 Ssb-like_OB
Other DBs
NCBI-ProteinID: AEM58337
UniProt: G0HRJ7
Position
I:complement(2655352..2656818)
AA seq 488 aa
MGAIEDIYEDLETDVPEEEFREAVEEKVEQMGGLADEETAAMLLAHELNENEVNAIADIE
PGMDEVKFLAKVMAIGDLKTFERDDEDEDGRVINVEAADESGSLRLAFWDGQAVDIDEGQ
LEVGDVLRVKGRPKDGYNGLEVSVDKAEPDDDATIDVEPGAGSSIDALTMGQSDVTLRGL
VLDTDTIRTFDRDDGSEGRVSNLTLGDETGRIRVTLWDDRADRAEELDAGAAVEIIDGYV
RERDGSLELHVGDQGAVDEVDDDVAFEPDADPIAEVELEETADIAGVVRSADPKRTFDRD
DGSEGQVRNVRIQDATGDIRVALWGDKADKDIAPGDEVLAADVEIQDGWQDDKEASASWN
STVVVLDDGADLATGGAGGGASAETTDAEHAGLSSFGDGADDADTDNSGDGAAAVSAGTG
DTSPDGGAQSAGQQVEFTGTVVQTGDPVVLDDGEQTMSVETGERVQLGQEITVRGELHDD
RLHAEDVF
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgggtgcgatagaggacatttacgaggacctagagacggacgtccccgaggaggagttc
cgcgaggccgtcgaggagaaggtcgagcagatgggcgggctcgccgacgaggagacggcc
gcgatgctgttggcccacgagctcaacgagaacgaggtcaacgccatcgccgatatcgaa
cccgggatggacgaggtgaagttcctcgccaaggtgatggccatcggcgacctgaagacc
ttcgaacgcgacgacgaggacgaggacggccgggtcatcaacgtcgaggcggccgacgag
agcggcagcctcaggctcgctttctgggacgggcaggccgtcgatatcgacgaggggcaa
ctggaggtcggcgacgtactccgggtgaagggtcggccgaaggacggctacaatgggctg
gaggtgtccgtcgacaaggcggagccggacgacgacgccacaatcgacgtggagccgggc
gctggctcgtccatcgacgcgctgacgatgggccagtccgacgtgacgctgcgcgggctc
gtgcttgataccgacaccatccggacgttcgaccgggatgacggcagcgagggccgtgtc
tcgaacctcacgctcggcgatgagacggggcgtatccgggtgacgctgtgggacgaccga
gccgaccgcgccgaggaactcgatgcgggggcggccgtggagataatcgatggctacgtc
cgggagcgggacggctcgctggaactccacgtcggcgaccaaggggccgtcgacgaagtg
gatgacgacgtggcctttgagcccgacgctgacccaatcgcggaggtcgaactcgaagag
acagccgatattgctggcgtcgtgcgctcggccgaccccaagcggacgttcgaccgcgac
gacggcagcgagggacaggtccgaaatgtccgcatccaggacgcgacgggcgacatccgc
gtggcgctgtggggcgacaaggcggacaaggacatcgcgccgggcgacgaagtgctcgcg
gcggatgtcgaaatccaggacggctggcaggacgacaaggaggcctcggcgagctggaac
tctacggtcgtcgtgctcgacgacggcgcggatctggcgactggtggcgcaggtggggga
gccagcgccgagacgaccgacgccgaacacgccggcctgtcctccttcggtgacggtgcg
gacgacgctgataccgacaacagcggcgacggggcggccgcagtcagtgctggtaccggc
gacacgtcgccggacggtggcgcacagagcgccggccagcaggtggagttcaccggcacc
gtcgtccagaccggcgaccccgtggtgctggacgacggcgagcagacgatgagcgtcgaa
accggcgagcgcgtgcagttagggcaggagataacggtccgtggcgaactccacgacgac
cggcttcacgctgaggacgtgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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