KEGG   Halobacteroides halobius: Halha_1618
Entry
Halha_1618        CDS       T02401                                 
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
hhl  Halobacteroides halobius
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hhl03009]
    Halha_1618
Enzymes [BR:hhl01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Halha_1618
Ribosome biogenesis [BR:hhl03009]
 Prokaryotic type
  ribosomal protein modification factors
   Halha_1618
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM CLP1_P
Other DBs
NCBI-ProteinID: AGB41556
UniProt: L0K960
Position
complement(1631413..1632741)
AA seq 442 aa
MLQVGLLTLGCAKNQVDSEIMLGLIQKAGYQIIDEYKKADVLIVNTCGFISDAKEESVES
ILQLAHYKEEGNCKLLIATGCLAQGYNEELADEIPEIDAFLGTGDFDQIVEVIEESLEGA
KKLKVSNPDFDYDRNLPKNNLTTGATAYVKIAEGCNNCCSYCVIPKLRGGLRSRSIENIV
KEVKNLAKQGIKEVNIIAQDITQYGIDLYGEARLVDLLKELVKVAEIKWFRLLYAYPTRV
SDELINLIATEDKICNYLDLPVQHADQEIREKMNRRGDKVAILDVVNRLRDRIPNIALRT
SVIVGFPGETEDNFRNLLDFIEQAEFDRLGAFTYSQEEGTSAAQMSCQIPEPRKEERYKK
VMQLQQRISQRHNQNLIGKEVKVLLEEVHSKEPRIMVGRSQREAPDVDGVIYVEDTEAKV
GEMIKVKLTNGYEYDLTGVEVK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgctacaagttggcttattaacattaggttgtgctaaaaatcaagttgattcagaaatc
atgttaggtttaatacaaaaggcaggatatcagattatagatgagtataaaaaagctgat
gttttaattgttaatacatgtggttttatttcagatgctaaagaagaatcagttgaaagc
attttacagttagctcattataaagaagaaggaaattgtaagttattaattgcaactggt
tgtttggcccaaggttataatgaggagttagcagatgaaattcctgagatagatgctttt
ttaggaactggagattttgatcagattgtagaggtaattgaagaatctttagaaggagct
aaaaaattaaaggttagcaatccagattttgattatgatcgaaatttacctaaaaataat
ttaactacaggtgctactgcttatgttaagattgcagagggctgtaataattgttgttct
tattgtgtgatacctaagttaagaggaggactaagaagccgttctatagaaaatatagtg
aaggaagtaaaaaacttagcgaagcaaggaattaaggaagttaatattattgctcaagat
ataactcagtatgggatcgatctatacggagaggcaaggttagttgatttattaaaagag
ttagtaaaagtcgcagaaatcaagtggtttagattattatatgcttatccaacgcgtgta
tctgatgagttgattaatttaatagcaactgaggataagatttgtaattatcttgattta
ccagtacaacatgcagaccaagagattagagaaaagatgaatagaagaggagataaagta
gcaatattagatgtagttaatagattacgggatagaatacctaatattgctttaagaacc
tctgtgattgtaggttttccgggtgagactgaagataatttcagaaatttattagatttt
attgaacaagcagaatttgatcggctaggtgctttcacttattcacaagaagaagggact
tcagcagcacaaatgtcttgtcaaattccagaaccaagaaaagaagaacgctataaaaaa
gtaatgcagctgcaacaaagaatttctcaacgacacaatcaaaatttgattggaaaagaa
gtcaaggtgcttttagaagaagtacattccaaagagcctaggattatggtagggagaagt
caaagagaagcaccagatgttgatggagtaatttatgtggaggatactgaagcaaaagta
ggagaaatgattaaggttaaactaactaatgggtatgaatatgacttaacgggagtggaa
gtaaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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