KEGG   Helicobacter heilmannii: BN341_16110
Entry
BN341_16110       CDS       T02626                                 
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hhm  Helicobacter heilmannii
Pathway
hhm03410  Base excision repair
hhm03430  Mismatch repair
hhm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN341_16110
   03430 Mismatch repair
    BN341_16110
   03440 Homologous recombination
    BN341_16110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhm03400]
    BN341_16110
DNA repair and recombination proteins [BR:hhm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BN341_16110
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BN341_16110
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BN341_16110
SSDB
Motif
Pfam: DHH DHHA1
Other DBs
NCBI-ProteinID: CCM10779
Position
1479449..1480756
AA seq 435 aa
MLEEFRVHIESISKADGTHKFSLDSVLEMGEGHKALELLVRAIQEQKQIIIGGDYDCDGM
SGTALALYFFKEVLHYSNINYIIPRRNIDSYGMSVELLQAYAHQERLVKTYYNARGQSLG
GKPLDFKDSLFLTIDNGATIPDEVCAFLHAHNTPLILSDHHEFLEGRIPACDAFIHPLLG
DNHPFQGISGACVGYLFLLTYAKHTKVKMRLDHLQYLQVLAGLSTIGDMMDLSAPYNRQL
VQRMDHTLKTAMPNSLKALYLAQKYQNPYKLSALAWDIIPLINAVGRLDGIEGFCHCNLV
VDLLATREANPTYATLLVQTNQKRKECIQEIKKRLQPTQKGALIYAGGQIPRGVLGMLAN
QFLEMGGRLSLCWRFENTSIEASLRSKEADLMQILSKLKENGIGVQGGGHKQACGLVFET
NGDFYHALEILSTCK
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgttagaggaatttagggtgcatattgagagcattagcaaggcggacggcacgcataaa
tttagccttgatagtgtcctagaaatgggcgaggggcacaaggctttagagcttttagtc
cgtgccatccaagagcaaaagcaaatcatcatcgggggagattacgattgcgatggcatg
agtggcacggctttagccctgtatttctttaaagaggtgctgcactactccaacatcaat
tacatcatccccagacgcaacatagacagctatggcatgagtgtagaactcttacaagcc
tacgcccatcaagaacgcttagtgaaaacctactataacgctagagggcaaagcttaggg
ggcaagcccctagactttaaagacagcctatttctcactatagacaatggggcaaccatc
cccgatgaggtgtgcgcctttttacacgcccacaacacgcccctaattttaagcgaccac
cacgaatttttagaggggcgtatccccgcttgcgatgccttcatccaccctttacttggc
gacaaccacccctttcaaggcatcagcggggcgtgtgtagggtatttattcttgcttact
tacgccaaacacaccaaagtgaaaatgcgcctagaccacctacaatatttacaagtctta
gccgggcttagcactataggcgacatgatggacttaagcgcgccctacaaccgccaactc
gtgcagcgcatggaccacactctaaagactgccatgccaaactcactcaaagccctatac
ttggcccaaaaataccaaaatccctataagctgagtgctctagcgtgggacatcatcccg
ctcatcaacgccgtgggacggctcgatggcattgaggggttttgccattgtaatttagtc
gtggatttactcgccacaagagaggccaaccccacttacgccacgcttttagtgcagacc
aatcaaaaacgaaaagagtgtatccaagagattaaaaagaggctacagcccacgcaaaaa
ggcgcgctcatctatgcgggcgggcagatccctagaggggttttaggcatgctcgccaac
caattcttagaaatgggaggcaggctgtctttgtgttggaggtttgaaaacacaagcatt
gaagcatccttgcgctctaaagaggcggatttaatgcaaattttaagcaaacttaaagaa
aatggcattggcgtgcaaggcggggggcataagcaggcgtgcgggctcgtctttgaaacc
aacggcgatttttaccatgccctagagattttaagcacttgtaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system